LOC110522446 (bmp2)


Basic Information

Item Value
gene id LOC110522446
gene name bmp2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 28630004 ~ 28636513 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021600839.2
CTAGTGTGCTGCACTCAGGAGAGAGAGGTTAAGCTCCCACAGCCACACACTATACAGTCTGATCTTCTACACCCGGTCTCTGCTAAACTTTATCTAAAAGTTCGCATTTGAAGATGTTCAACGACACTGCTTTATACTTAGATCCGTCCTGCCTACACCAGTCTGCTTCCTCCTCATAGATATAACTTTAGgcgatttttgtattttattgacCAAGACGTCTCCAGATTCCCAGCTGCGGAGATATGTGCGAGAGAACGGGGTCGGAGCAGTGCACGGACTGTCTTTCGCCCGCAGAGGAAAAGCGTGGAATAAACACGAATTAATGTGGAATTTATTGGAGCCCAAAGCTGGAAGGACGACTGGACACAGCGCTTCCTTATCAGGGACTAACTGACCATGGTCGCCGTGTTTCGTTCTCTCATGGTACTGCTGCTGGCTCAGGTGTTGCTGGGAGGCGCTGCGGGACTAATCCCCGAGGTTGGCCGGAGGAAGTACAGTGAGTCGGAGAAACAGAGCCCGGAGCAGTCGGAGAACTTTCTCAACGAGTTCGAGCTGCGGCTCCTCAATATGTTCGGACTTAAGCGGAGGCCGAACCCGAGCAGACAGGCTGTGGTGCCTCAGTACATGGTGGACCTGTACCGTATGCATTCGTTGAACGGAGACCACAGCATTAAACGGCCCCGGAGCATGGGGAGGCACGCAGAGAGAGCCGCCAGCAAGGCCAACACGATTAGAAGCTTTCACCACGAAGagtccatggagGCTCTGGCCAGTCTGAAGGGCAGGACAACCCAGCAGTTCTTCTTCAACCTCACCTCCATCCCTGGAGAAGAGCTTATCACCTCTGCAGAGCTCCGGGTATACAGGGACCAGGTCCTGGGGGCCACAGCAGCTCCCACCAGTAACACCAGTCACAACAGCAGTAACAGCTCCAGGACCAGTGCTGGTGGCTTCCATCGTATCAACGTGTACGAGGTGTTTGGAGGCCCTGCGTCTCCCCGTGGGGAACCCCTGACACGCCTCTTGGACACGCGGCTGGTGCAGGACTCTCTGAGCCGCTGGGAGAGCTTTGATGTCAGCCCCGCCGTGTCACAGTGGACCTCCGGGGGGCGCCACAACCACGGCTTCCTGGTTGAGATGCTCCACCCAGACACCCTGGAGGGCGAAGAGGGCCAAAGACAGAGACGACACGTCAGGGTAAGCCGCTCCCTCCACGGGGACCAGGACTCATGGCCCCAGGCTCGCCCCCTGCTGGTGACCTATGGTCATGACAGGCAGGGGAATGCGGTGCTACACAGGGACAAGAGACAGGCAGCAGGCCACAGGAAACAGAGGAAGAAGCACCAACACAAGGCCAACTGCCGCAGACATGCCCTCTACGTGGACTTCAGCGACGTGGGCTGGAATGAGTGGATAGTTGCACCCCCTGGCTACCATGCCTTCTACTGCCACGGGGAGTGCCCCTTCCCATTGGCCGACCACCTCAACTCCACCAACCACGCCATCGTTCAGACGCTGGTCAACTCTGTGAACTCCAACATCCCCCGGGCGTGCTGCGTGCCCACAGAGCTCAGCCCCATATCACTGCTCTATCTGGACGAGTATGAGAAGGTCATCCTCAAAAACTACCAGGAtatggtggtggaggggtgtggCTGCCGGTGAGACACACCGAGACAGAAGGGTGGAGCGATGCAGAgactcagaaagagagagagagggaggttataTGGACACCCGGTTTCCCAATGAAGACGTTTTATTTATATGACAGAAAAGACACAAACATAGCTATTTTGGAAGAAGattaaaaaacaaatatatatgaatatatttaTGTCTACTTAAAGTtgggaaaaaaaataaatattttactcAGAGGAATAATCCTTTACtggttttgaaaatgtatttctgATGTACACTTTTCGAAATGGGTGCAATACCACATGAAGTACAATGCTcagatttttatttgtatttatttctatTATAACCACTTTATTTGTAAATAAATAATGTGTATTTATCATGAGAAAA

Function

symbol description
bmp2 Enables several functions, including BMP receptor binding activity; co-receptor binding activity; and phosphatase activator activity. Involved in several processes, including regulation of cellular biosynthetic process; regulation of signal transduction; and transmembrane receptor protein serine/threonine kinase signaling pathway. Acts upstream of or within several processes, including animal organ development; positive regulation of cellular metabolic process; and regulation of transmembrane receptor protein serine/threonine kinase signaling pathway. Located in cell surface; extracellular space; and intracellular membrane-bounded organelle. Part of BMP receptor complex. Implicated in bone disease (multiple); hemochromatosis type 1; otosclerosis; prostate cancer; and tooth agenesis. Biomarker of prostate cancer and prostate carcinoma.

NR:

description
bone morphogenetic protein 2-like

GO:

id name namespace
GO:0040007 growth biological_process
GO:0005576 extracellular region cellular_component
GO:0008083 growth factor activity molecular_function

KEGG:

id description
K21283 BMP2; bone morphogenetic protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021600839.2 True 2043 mRNA 0.52 3 28630004 28636513

Neighbor

gene id symbol gene type direction distance location
LOC110522445 LOC106608054 coding upstream 62704 28558200 ~ 28567300 (+)
LOC110522440 atad2b coding upstream 667637 27800923 ~ 27962367 (+)
LOC118964460 NA coding upstream 757026 27871143 ~ 27872978 (+)
LOC110522435 wdcp coding upstream 865452 27757433 ~ 27764552 (+)
opn8b LOC106608041 coding upstream 965585 27624700 ~ 27664419 (+)
LOC110521072 plcb1 coding downstream 62554 28699067 ~ 28934753 (+)
LOC110522448 plcb4 coding downstream 321571 28958084 ~ 29140138 (+)
LOC110522450 LOC106608065 coding downstream 516961 29153474 ~ 29163882 (+)
LOC118964462 NA coding downstream 538813 29174963 ~ 29176894 (+)
LOC118964461 NA coding downstream 546366 29182879 ~ 29186037 (+)
G339376 NA non-coding upstream 57237 28571319 ~ 28572767 (+)
G339362 NA non-coding upstream 77691 28545713 ~ 28552313 (+)
G339334 LOC100194698 non-coding upstream 132242 28491256 ~ 28497762 (+)
G339265 NA non-coding upstream 233902 28395892 ~ 28396102 (+)
G339254 NA non-coding upstream 244114 28385605 ~ 28385890 (+)
G339562 NA non-coding downstream 19679 28656192 ~ 28656552 (+)
G339583 NA non-coding downstream 67618 28704131 ~ 28704994 (+)
G339590 NA non-coding downstream 76450 28712963 ~ 28713614 (+)
G339591 NA non-coding downstream 77388 28713901 ~ 28714105 (+)
G339592 NA non-coding downstream 77698 28714211 ~ 28714439 (+)
LOC118964415 LOC106608050 other upstream 1028448 27537262 ~ 27601564 (+)
LOC110522355 plekhg1 other upstream 1445034 27054628 ~ 27185449 (+)
G336464 NA other upstream 1735167 26892229 ~ 26894837 (+)
LOC110522376 sash1 other upstream 2572313 25761890 ~ 26057813 (+)
G334473 armt1 other upstream 4207273 24420114 ~ 24422731 (+)
G339660 NA other downstream 222203 28858716 ~ 28859155 (+)
G339693 NA other downstream 278086 28914599 ~ 28915539 (+)
G339830 LOC100846954 other downstream 530005 29166518 ~ 29166996 (+)
G339928 NA other downstream 698856 29335369 ~ 29336939 (+)
G342538 NA other downstream 2745313 31381826 ~ 31382749 (+)

Expression


Co-expression Network