Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110522449 |
| gene name | LOC106571559 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 29168303 ~ 29300647 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: serine/threonine-protein kinase PAK 7 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021600844.2 | False | 4128 | mRNA | 0.51 | 11 | 29168303 | 29300633 |
| XM_021600842.2 | False | 4174 | mRNA | 0.51 | 12 | 29168303 | 29300634 |
| XM_021600841.2 | False | 4181 | mRNA | 0.51 | 13 | 29168303 | 29300635 |
| XM_021600843.2 | False | 4136 | mRNA | 0.51 | 12 | 29168303 | 29300635 |
| TU385537 | True | 545 | TUCP | 0.51 | 3 | 29245223 | 29300647 |
29,080,000
29,100,000
29,120,000
29,140,000
29,160,000
29,180,000
29,200,000
29,220,000
29,240,000
29,260,000
29,280,000
29,300,000
29,320,000
29,340,000
NC_048568.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521071 | LOC106608053 | coding | downstream | 584261 | 28571419 ~ 28584042 (-) |
| LOC110520983 | NA | coding | downstream | 597692 | 28567300 ~ 28570611 (-) |
| LOC110522444 | LOC106608056 | coding | downstream | 645690 | 28500354 ~ 28522613 (-) |
| LOC110522443 | LOC100194698 | coding | downstream | 670232 | 28485863 ~ 28498071 (-) |
| LOC110522441 | LOC106608058 | coding | downstream | 785071 | 28371011 ~ 28383232 (-) |
| LOC118964416 | NA | coding | upstream | 18698 | 29319333 ~ 29320487 (-) |
| LOC110521073 | LOC106608076 | coding | upstream | 81684 | 29382319 ~ 29405640 (-) |
| LOC110521074 | NA | coding | upstream | 110460 | 29411095 ~ 29422232 (-) |
| LOC110522457 | LOC106608095 | coding | upstream | 355298 | 29655933 ~ 29682272 (-) |
| LOC110522459 | LOC106608094 | coding | upstream | 382106 | 29682741 ~ 29685817 (-) |
| G340635 | NA | non-coding | downstream | 1486 | 29166539 ~ 29166817 (-) |
| G340624 | NA | non-coding | downstream | 20175 | 29147828 ~ 29148128 (-) |
| G340620 | NA | non-coding | downstream | 21831 | 29143402 ~ 29146472 (-) |
| G340622 | NA | non-coding | downstream | 26049 | 29141998 ~ 29142254 (-) |
| G340585 | NA | non-coding | downstream | 81080 | 29086747 ~ 29087223 (-) |
| G340718 | NA | non-coding | upstream | 17758 | 29318393 ~ 29319172 (-) |
| G340724 | NA | non-coding | upstream | 30107 | 29330742 ~ 29333700 (-) |
| G340732 | NA | non-coding | upstream | 45666 | 29346301 ~ 29347368 (-) |
| G340753 | NA | non-coding | upstream | 107159 | 29407794 ~ 29409470 (-) |
| G340468 | NA | other | downstream | 311117 | 28856829 ~ 28857186 (-) |
| G339008 | NA | other | downstream | 1245199 | 27922449 ~ 27923104 (-) |
| LOC110522434 | fkbp1b | other | downstream | 1411316 | 27730407 ~ 27757242 (-) |
| G337894 | NA | other | downstream | 2398138 | 26767374 ~ 26770165 (-) |
| G337207 | NA | other | downstream | 3534240 | 25633717 ~ 25634063 (-) |
| G340879 | NA | other | upstream | 346554 | 29647189 ~ 29647530 (-) |
| G341017 | NA | other | upstream | 615027 | 29915662 ~ 29916190 (-) |
| LOC118964463 | LOC106608127 | other | upstream | 1723124 | 31023759 ~ 31107906 (-) |
| G342376 | NA | other | upstream | 1888870 | 31189505 ~ 31294180 (-) |
| G343300 | antiprot1 | other | upstream | 2820631 | 32107969 ~ 32123886 (-) |
| LOC110487406 | NA | coding | downstream | 70394 | 29172184 ~ 29183894 (-) |
| G340669 | NA | non-coding | downstream | 4040 | 29240890 ~ 29241183 (-) |
| G340667 | NA | non-coding | downstream | 6117 | 29238800 ~ 29239106 (-) |
| G340663 | NA | non-coding | downstream | 11861 | 29233131 ~ 29233362 (-) |
| G340658 | NA | non-coding | downstream | 17314 | 29225608 ~ 29227909 (-) |
| G340657 | NA | non-coding | downstream | 23701 | 29221303 ~ 29221522 (-) |
