LOC110522461 (LOC106608092)


Basic Information

Item Value
gene id LOC110522461
gene name LOC106608092
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 29717778 ~ 29727201 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021600882.2
cgaagcggggctgggctcgagccgtgGCTGGGGAAGGAGTCGCTCCATCGCCATCCTCTCGCCACCATTGGAAGTttgttgtgcggcccatctcgcgTGACTTTTATTTGAGtcaagtatctttacttttactcaagtatgacaattgggtacttttttcaccactgaCAATTAGCTACAACATAGCTAATGGATATAACACAGATTTGGTGACACTTCTGGCTCAAAAGCGAATGTAGgaaccaggggggggggggtactgtacaTTTGTCTAACATAATCCGGCTAATGGCAGTGTCAAGGTGGAAGTGTGCGCTTCATCCTCCAGAGGGCTCACTTCTGATTGGTGAAAGGCTAGTTGGGGTGTGGTCAAAGGGCATATAACTGCATGTTATTGCTTTGGGGCTCTTCTGTTGGTTGTTGCTTCTAGTTGTATCTTCTATCCAGTTAAATCAGGACTCAGAAGCAGTGTCAATTAGGCTATCTAGTTGGCTAAACTAAACTTTCCTCTACACAACTGCCTCAGTCTCCACTCTTCTATTAGTTGAGTTGACTAAAATACCCATTAGTCCATCAGGTTTAGCCTAATCTCTTGGCTTCATACCCATCAGAGGGACACTCATCTCCTGCTCCTTCACCAGAGTGAAGATGTCTCTCCAGGCTCCGCTCCAACCTGCAGTGGTCCTGTCTCTGGTTCTGGTTGTGTTGGCTCTGACAGAGCTGTCCCGTGCCCAGCTCCAGCCCAAGGCTTCTGTCCTGGATTTCTCAGCCAGCCTGGGTAACCTCCTCCCCAGCCTCAGCCGTCCGGCCAACTCCAGCCGGATCTTCTACGGGGTAATGTTTGACGCTGGCAGCACTGGGACACGCATCCATGTCTACACCTTCATACAGAAAGACCCTGAGGAGTTACCAGTGCTGGATAATGAGATGTTCCATTCCGTCAAGCCTGGTCTGTCGGCATACGCAGACATGCCTGAAATAGGTGGGTACACAGTGAGGCAGCTTCTTAAGGTGGCAAAGAAGACTGTCCCGCAGCTGGATTGGAAGAGAACCCCACTGGTCCTGAAAGCTACAGCAGGATTCAGGCTGCTGCCCCCAGAGAAAGCCCATGCTCTGCTGGAACAGGTGCAGGACGTGTTTGATGAATCTCCCTTCTTCGTCCCAGACGACAGCGTCAGCATAATGGATGGTACAAATGAAGGAATTTTGGCGTGGGTTACTGTGAACTTTTTGACAGgtcacctGTATGCTGAGACCAGGAACACAGTGGGGATTCTAGATCTGGGGGGTGGATCAACTCAAATCACTTTTCTACCCAAATCCAAGAAAACCATTGTAAGTTCTCCTGCTGACTACATTGCCAGATTTGACATGTTCAACTCTACATATGAACTATACACTCACAGCTACCTGGGTAATGGACTGATGGCAGCCAGACTGGCAGCCCTAGGAGCactgggggcagaagGGTTGGAGTGGAGAGTGTTCAAAAGCGCCTGTCTGCCCAAGAAGTTCAGAGAGGAGTGGAGCTTTGGAGGACTCACCTACACAGTCAGCGGGATACCTGATGGTTATGCAGGATACAAGCTGTGTTACCAGGAGGTGTTGAAGGTGGTAAAGGGAATAGTTCACCAGCCCTATGAGTTGAAAGACACCAGTGTGTTCTATGCTTTCTCCTACTACTTTGACAGAGCCGTGGACGCAGGCCTTattgATGGGACCCAAGGAGGAATGCTGGAGGTCAGAGACTTTAAGAGGGGAGCTAAAGAGGTGTGTAACAAGATGTCTAAGTACCGTCCTGTCAGCCCCTTCTTGTGTATGGACATGACCTACATCACCTGTCTGCTCAAAGATGGCTTCGGCTTCAAAGAGAACACTGTACTGCAGCTGACTAAGAAGGTGAACAATATTGAGACAAGCTGGGCGTTAGGTGCCACGTTCAAACACTTCCAGAACCTAAAGATCCACTGAGAGACATAAGCCACAGGGTTGGGTGGGCAGGTGGGATCACTGGTTTACATGGTGCTCAACAAGAAATGGACTGAGGAATACTTGTTTTAAACTGATAAGCCTTTGTGTCTtgtgaaatgtaatgttttatagATATGCCATATTtgcattttacatttgagatgaCATTACAATTGTTACCCAACACACATAACTGGTACTATAGTTCAGTAGGTCTGTTGTTTTCATGTGACTGGCTGCTATACTGTAGCCttgtattatatacacacacgtcTCTATTAAAGCACTGGGGGCTGAAACTCAA

Function

NR:

description
ectonucleoside triphosphate diphosphohydrolase 5-like

GO: NA

KEGG:

id description
K01511 ENTPD5_6; ectonucleoside triphosphate diphosphohydrolase 5/6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021600882.2 True 2275 mRNA 0.48 13 29717778 29727201

Neighbor

gene id symbol gene type direction distance location
LOC110522458 mmsa coding upstream 10977 29686032 ~ 29706801 (+)
LOC110522456 LOC106608096 coding upstream 76661 29633676 ~ 29641117 (+)
LOC110522454 LOC105017530 coding upstream 85407 29480176 ~ 29632371 (+)
LOC110522453 LOC106608073 coding upstream 239572 29463955 ~ 29478206 (+)
LOC110522452 LOC106608075 coding upstream 256396 29422294 ~ 29461382 (+)
LOC110522463 LOC106608087 coding downstream 60367 29787568 ~ 29798140 (+)
LOC110522467 LOC106608085 coding downstream 111168 29838369 ~ 29842910 (+)
LOC110522470 prpf39 coding downstream 214975 29942176 ~ 29952127 (+)
LOC110522472 rs30 coding downstream 225260 29952461 ~ 29957558 (+)
LOC110522479 NA coding downstream 1069018 30796219 ~ 30797687 (+)
G340107 NA non-coding upstream 32172 29685352 ~ 29685606 (+)
G340106 LOC106608094 non-coding upstream 33565 29683820 ~ 29684213 (+)
G340081 NA non-coding upstream 69994 29647462 ~ 29647784 (+)
G340011 NA non-coding upstream 219244 29498147 ~ 29498534 (+)
G340125 LOC106608091 non-coding downstream 10792 29737993 ~ 29738401 (+)
G340153 NA non-coding downstream 42605 29769806 ~ 29770443 (+)
G340155 NA non-coding downstream 71058 29798259 ~ 29803141 (+)
G340182 NA non-coding downstream 99070 29826271 ~ 29826549 (+)
G340193 NA non-coding downstream 124039 29851240 ~ 29851549 (+)
G339928 NA other upstream 380839 29335369 ~ 29336939 (+)
G339830 LOC100846954 other upstream 550782 29166518 ~ 29166996 (+)
G339693 NA other upstream 802239 28914599 ~ 28915539 (+)
G339660 NA other upstream 858623 28858716 ~ 28859155 (+)
LOC118964415 LOC106608050 other upstream 2116222 27537262 ~ 27601564 (+)
G342538 NA other downstream 1654625 31381826 ~ 31382749 (+)
LOC110522493 LOC106608104 other downstream 1690754 31417955 ~ 31422086 (+)
G342571 NA other downstream 1723932 31451133 ~ 31451476 (+)
G342707 LOC106608120 other downstream 2058664 31785865 ~ 31786206 (+)
G343958 NA other downstream 2967785 32694986 ~ 32704371 (+)

Expression


Co-expression Network