Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110522472 |
| gene name | rs30 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 29952461 ~ 29957558 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ubiquitin-like protein FUBI |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02983 | RP-S30e, RPS30; small subunit ribosomal protein S30e |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021600897.2 | True | 600 | mRNA | 0.54 | 5 | 29952461 | 29957558 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522470 | prpf39 | coding | upstream | 334 | 29942176 ~ 29952127 (+) |
| LOC110522467 | LOC106608085 | coding | upstream | 109551 | 29838369 ~ 29842910 (+) |
| LOC110522463 | LOC106608087 | coding | upstream | 154321 | 29787568 ~ 29798140 (+) |
| LOC110522461 | LOC106608092 | coding | upstream | 225260 | 29717778 ~ 29727201 (+) |
| LOC110522458 | mmsa | coding | upstream | 245660 | 29686032 ~ 29706801 (+) |
| LOC110522479 | NA | coding | downstream | 838661 | 30796219 ~ 30797687 (+) |
| LOC110522477 | mgat2 | coding | downstream | 858858 | 30816416 ~ 30823059 (+) |
| LOC110522488 | hs90a | coding | downstream | 1212093 | 31169651 ~ 31182712 (+) |
| ppp2r5cb | LOC106608134 | coding | downstream | 1229668 | 31187226 ~ 31227364 (+) |
| slc25a29 | LOC106608124 | coding | downstream | 1434621 | 31392179 ~ 31401929 (+) |
| G340247 | NA | non-coding | upstream | 12345 | 29939828 ~ 29940116 (+) |
| G340245 | NA | non-coding | upstream | 18587 | 29933621 ~ 29933874 (+) |
| G340244 | NA | non-coding | upstream | 19066 | 29933158 ~ 29933395 (+) |
| G340243 | NA | non-coding | upstream | 19766 | 29932476 ~ 29932695 (+) |
| G340242 | NA | non-coding | upstream | 20158 | 29931825 ~ 29932303 (+) |
| G340258 | NA | non-coding | downstream | 14604 | 29972162 ~ 29972386 (+) |
| G340259 | NA | non-coding | downstream | 15789 | 29973347 ~ 29974350 (+) |
| G340260 | NA | non-coding | downstream | 17584 | 29975142 ~ 29975459 (+) |
| G340263 | NA | non-coding | downstream | 20517 | 29978075 ~ 29978330 (+) |
| G340267 | NA | non-coding | downstream | 30837 | 29988395 ~ 29989043 (+) |
| G339928 | NA | other | upstream | 615522 | 29335369 ~ 29336939 (+) |
| G339830 | LOC100846954 | other | upstream | 785465 | 29166518 ~ 29166996 (+) |
| G339693 | NA | other | upstream | 1036922 | 28914599 ~ 28915539 (+) |
| G339660 | NA | other | upstream | 1093306 | 28858716 ~ 28859155 (+) |
| LOC118964415 | LOC106608050 | other | upstream | 2350905 | 27537262 ~ 27601564 (+) |
| G342538 | NA | other | downstream | 1424268 | 31381826 ~ 31382749 (+) |
| LOC110522493 | LOC106608104 | other | downstream | 1460397 | 31417955 ~ 31422086 (+) |
| G342571 | NA | other | downstream | 1493575 | 31451133 ~ 31451476 (+) |
| G342707 | LOC106608120 | other | downstream | 1828307 | 31785865 ~ 31786206 (+) |
| G343958 | NA | other | downstream | 2737428 | 32694986 ~ 32704371 (+) |
