LOC118964496


Basic Information

Item Value
gene id LOC118964496
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 32910710 ~ 32912647 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976476.1
ATGCCcatacctccccacctccccaccacccaaCTGGCCGTAACTCACCTACCACCCTACTGCCCATACCTCCCCCACCACCCAACTGCCCATACCTCCCCCACCACCCTACTGCCCATACCTCCCCCACCACCCAACTGCCCATACCTCCCCCACCACCCTACTGCCCACACCTCCCCCACCACCCAACTGCCCATACCTCCCCCACCACCCAACTGCCCATACCTCCCCCACCACCCACCTGCCCATACCTCCCCCACCACCCTACTGCCCATACCTCCCCCACCACCCAACTGCCCATACCACCCCACCACAAAACTGCCCATACCTCCCCCACCACCCAACTGCCCATACCtcccccaccacccaccacccaacTGCCCATACCTCCCCCACCACCCTACTGCCCATAGCTCCCCCACCACCCAACTGCCCATACCtgcccaccaccccaccacacaaCTGCCCATACCTCCCCCACCACCCAACTGCCCGTACCTCCCCTACCACCCTACTGCCCATACCTCCCCCACCACCCAACTGCCCATACCTCCCCCACCACCCTACTGCACATACCTCCCCCACCACCCAACTGCCCATACctccccaccaccccaccacccaaCTGCCCATACCTCCCCCACCACCCATCTGCCCATACCTCCTTCCACCACCCAACTGCCCATACCACCCCACCACCCAACTGCCCATACCTCCCCACCACCCAACTGCCCATACCTCCCCACCACCCAACTGCCCATACCTTCCCCACCACCCAACTGCCCATACCTCCCCCACCACCCAACTGCCCATACctccccaccaccccaccacccaaCTGCCCATACCTCCCCCACCACTCAACTGCCTGTACCTCCCCCACCACCCAACTGCCCATACCTCCCCCACCACCCAACTGCCCATACctccccaccaccccaccacccaaCTGCCCATACCTCCCCACCACCCAACTGCCCATACCTCCCCACCACCCAACTGCCCATACCTCTCCACCACCCAACTGCCcatacctccctacctccccacCACCCAACTGCCCGTACCTCCCCACCACCCAACTGCCCATACCTCCCCACCACCCAACTGCCCATACCTCCCCCACCACCCAACTGCCCATACCTCCCCACCACCCAACTGCCCATTCCCCACCACCCAACTGCCCATACCTCCCCACCACCCAACTGCCCATACCTCCCCCACCACCCAACTGCCCATACCTACCCACCACCCAACTGCCcatacctccccacctccccaccacccaaCTGCCCGTACCTCCCCACCACCCAACTGCCCATGCCTCCCCACCTCCCAACTGCCcatacctccccacctccccaccacccaaCTGGTCGTACCTCCCCACCACCCAACTGCCCGTACCTCCCAACCACCCAACTGCCCATACCTTTCCCACCACCCACCTGCCCATACCCCACCACCCAACTCCCCACCACCCAACTGCCCATACCTCCCCACTCATCCAACTGCCCATACCTCCCCACCACCCAACTGCCCATACCCCCCTCCACCCACACCCCCCCTCCACCCAACTGCCCATACCCCCCTACCACCCATCTGCCCATACCCCCCCCACCCAACTGCCCataccccacccccccacccacctgcCCATACCCCCACCACCCAACTGTCCACACCCCCAACCCCTCACCCAACTGCCCATACCCCCCCACCCAACTGCCCATACCCCCTCACAACAACTGCCCATACcctcccaccccccccacccaacTGCCCATACCCCCCACCACCCAACTGCCCATTCCCCACCACCCAACTGCCCATACCCCCCACCACCCAACTGCCCATACCCCCCCACCCAACTGCCCATACCCCTTTGTCAGAAATGAATGCATAGACACATCATTGTGTTGCACGTTTCTGTTctag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976476.1 True 1938 mRNA 0.64 1 32910710 32912647

Neighbor

gene id symbol gene type direction distance location
LOC110520987 NA coding upstream 45579 32854057 ~ 32865131 (+)
rnh1 rnh1 coding upstream 59892 32843934 ~ 32850818 (+)
LOC110520986 NA coding upstream 211107 32666288 ~ 32699603 (+)
LOC110522505 LOC106608111 coding upstream 369223 32534581 ~ 32541487 (+)
antiprot1 antiprot1 coding upstream 786868 32121260 ~ 32123842 (+)
LOC110521081 LOC106571614 coding downstream 52560 32965207 ~ 33118062 (+)
LOC110522507 LOC106608145 coding downstream 207002 33119649 ~ 33137510 (+)
LOC110522508 ccr6 coding downstream 228237 33140884 ~ 33145169 (+)
LOC110522510 LOC106608180 coding downstream 446309 33358956 ~ 33380970 (+)
LOC110522512 LOC106568622 coding downstream 477225 33389872 ~ 33402155 (+)
G344224 NA non-coding upstream 8320 32902117 ~ 32902390 (+)
G344121 NA non-coding upstream 66973 32840112 ~ 32843737 (+)
G344042 NA non-coding upstream 164961 32745377 ~ 32745749 (+)
G344041 NA non-coding upstream 165511 32744991 ~ 32745199 (+)
G343919 NA non-coding upstream 289049 32621404 ~ 32621661 (+)
G344307 NA non-coding downstream 157344 33069991 ~ 33072101 (+)
G344262 NA non-coding downstream 185155 33097802 ~ 33112718 (+)
G344319 NA non-coding downstream 185854 33098501 ~ 33102967 (+)
G344320 NA non-coding downstream 185996 33098643 ~ 33102179 (+)
G344261 NA non-coding downstream 191670 33104317 ~ 33105311 (+)
G343958 NA other upstream 206339 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 1124504 31785865 ~ 31786206 (+)
G342571 NA other upstream 1459234 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 1491454 31417955 ~ 31422086 (+)
G342538 NA other upstream 1527961 31381826 ~ 31382749 (+)
LOC110521085 LOC100380634 other downstream 559405 33469529 ~ 33489784 (+)
G344647 NA other downstream 639480 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 672331 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 1478326 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 1624354 34536950 ~ 34541410 (+)

Expression


Co-expression Network