zgc:112001 (LOC106608178)


Basic Information

Item Value
gene id zgc:112001
gene name LOC106608178
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33690618 ~ 33692358 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021600974.2
GGAAATCCCACTCCCAGTTCAGATGTGTGTTGGGGGCGGTTGCTGTGAAATGGGGGTCCTGTAGCCGATGTGTGTGCATGTAGGCTAATCCTGCGTGTGTGCTTGAACGTGTATATTATAATAGTTCGAAGTATTAGAATAGTCCGGCCTACATACAAACAATATAAGTATTTTAACCTAGTAGACTACCATGGACAGTATGTGCGATTTTAATTTTTATAAATAGCACATGCATGAACTGCGGTCTCATTGAAGGACACGAACGAGGGGCATTAGTAAAGCAATCGGACCTCAGATCATCATGTCTACTTCGGCTACGAACAATGGTAGACTCCATACGGACGAGAAATGCAAACAGCGAAAATACCAATCTTTTCTCTTCTACCAGGCCGTGCGGGATCTAAAGCCTGTTTGGATGTTGGAGGACATGCGGACAATGGAGACTTTTTACTGGGAGGAAGACGCCAGCCAGAGATCCTACACTCCCTCGGAGGCATTACTGTACGCTATCGTACATGACCACCAAGCCTACGCTCAATACTTGCTCAGTCATTACACCGATGAAGCACTGGCCATGCCCGGCGAGCGCTTTTGCTGCTGTCCATCATCGGCCCCGCATTTGGCGATGGCTGTCAGATATGACAGACGGGACATACTAGGTCTCATATTGCAAGAAGCGCATCGACTACCTAGTCTGCGGTCATATATGAACCGAGGCGGATGTTTTCACATGGAGGACGGTAAAACTCCACTGCATCTGGCCTGTGAGCTCCTGCGCTCAGAGTCCGTTATTCTGTTGTTGGGCAACGGCGCCTCGCCACAGGCAGAAGATCAAAACGGTATGACGCCATTGGATGTCATTTTGGAACAGCTGTGGGACTCCAAAGTGAACATTGGGCCCAAAAAGCTGTGTCTTGACAACTTGTTAATGTTTATGCCAGAGATTCGTTTCAAAATGAAGAGTGCGCTCGAAGGAGACCCAGTTTGTTGGTCCAAAGTCCTAGGTGAGGACAAATTCAAATACCTCGTTGGACAGAAGCCAGCTCCACTGTTTCTCATGGCTATGCAAACAATTCTGAGGCAGCTTCCACCAGAGCAGTTCCCTGACAGCCTAGATGAGCTTCCCATACCCTCCTCATTGAAACCACTACCCTGCAAACAGCTTGGACAGCTGAAAGTGTTTTAAACGTGTTTTGACAAGTTTTAAAAACTGTCTACATGATGTATTTATATGAATGTTTTAGCATGATTAAGATATCTGTGTGATGAGCATGTAGGCCCTATGTATTGTTGTGTCAATACAAACCCCTTGTATGAAATTAAGAGGCTATAAGAATGGGTGCTAATTATGATAATATCTGTGATTCAAGTTTCATATGAAATGAAGAGGTAATTGtgtaaattatttttatttgatttttaaaCCTTTTTATATAAGTTGTATGCAAATGTCTACAGTACTACAGACTACAGTATAACAATATATTTTCATTGCTGTGCTGAATTTGACGCTTTTATAGCCTACAGAACAAAGACCATGTGTGATTGGTTATCTGTATAGAATGATTACCTCAAATATGTTTAATAACTTAATAGGAATTATGATCTAGGAACTTTTAAACATATTTAAAATGCCACTATCAATTCCATTATGCTTCTCCAGTGAGCGCTTTCCTCATTATCAACATAATACTCAAGAGAAAAGAGAACTTGAGAAACAAATAAATCGAAACTCGCTTCA

Function

NR:

description
PREDICTED: ankyrin repeat domain-containing protein 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021600974.2 True 1741 mRNA 0.42 1 33690618 33692358
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110522525 NA coding downstream 48316 33640275 ~ 33643239 (-)
LOC110522520 LOC106608189 coding downstream 100272 33577450 ~ 33590346 (-)
LOC110522518 LOC106608186 coding downstream 114347 33566563 ~ 33576271 (-)
LOC110522517 LOC106608187 coding downstream 124989 33552126 ~ 33565629 (-)
LOC110522516 LOC106608185 coding downstream 160517 33492316 ~ 33530101 (-)
LOC110522529 LOC106608176 coding upstream 57891 33749940 ~ 33940233 (-)
kcnk10a LOC106608174 coding upstream 562634 34254992 ~ 34280216 (-)
LOC110522538 stxb6 coding upstream 737526 34429884 ~ 34436250 (-)
LOC110521086 LOC106608167 coding upstream 748543 34440901 ~ 34455193 (-)
LOC110522539 LOC106608168 coding upstream 766955 34459313 ~ 34463358 (-)
G345190 LOC106608180 non-coding downstream 19643 33655097 ~ 33670975 (-)
G345182 NA non-coding downstream 43228 33645932 ~ 33647390 (-)
G345178 NA non-coding downstream 57135 33632909 ~ 33633483 (-)
G345169 NA non-coding downstream 67926 33622303 ~ 33622692 (-)
G345228 NA non-coding upstream 45434 33737792 ~ 33738121 (-)
G345216 NA non-coding upstream 54076 33746434 ~ 33747301 (-)
G345215 NA non-coding upstream 55702 33748060 ~ 33748938 (-)
G345233 NA non-coding upstream 61317 33753675 ~ 33753957 (-)
G344164 NA other downstream 828514 32841256 ~ 32862104 (-)
G343300 antiprot1 other downstream 1566732 32107969 ~ 32123886 (-)
G342376 NA other downstream 2458832 31189505 ~ 31294180 (-)
LOC118964463 LOC106608127 other downstream 2584488 31023759 ~ 31107906 (-)
G341017 NA other downstream 3774428 29915662 ~ 29916190 (-)
G345248 NA other upstream 87939 33780297 ~ 33780638 (-)
G345255 LOC106585892 other upstream 97136 33789494 ~ 33790085 (-)
LOC110522548 5nt1a other upstream 1109731 34799157 ~ 34807617 (-)
LOC110522550 LOC106571659 other upstream 1140081 34832436 ~ 34886570 (-)

Expression

zgc:112001(LOC106608178) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 12.
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zgc:112001(LOC106608178) Expression in each Bioproject

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zgc:112001(LOC106608178) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
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Co-expression Network