LOC110522531 (LOC106608192)


Basic Information

Item Value
gene id LOC110522531
gene name LOC106608192
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 34129848 ~ 34133896 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021600978.2
GCAATTGTCCTTTTTTTGGATGCCTGCGTCAGCAAGACCTTTTTAAAATCACCACATGGCATACATGGAATCAGTTGACCATATTTGCAATTTCCATGATGTGTTAAAGAGTTTTTCAGACATTGTATTATCACCGAGGTACCGGATCTAGAATTTATCCCATTTGGCTATAAATAAGTTTCAGTCTTCACAGTCGCAGCTACCTCCGTCTCCCCATGCGCCTGGATGATGACGTGCAGGTCcaggcagaacgatagatttcaACAGCATCACTTCATAAAATATAGTCTTTCTATTGACAAATTAACTATTTAATTGGTACTAGTAAACGGCGACTAAATAATTAGAGTTTTGTCCACTGCCTTCTGAGTGTTTGTTGGCTCGCGGAACATACGGACCATGCATCTGAACCACTCCGCGGACCACGAGACCACTCTCCGTGGCGGGAAAAGGGGTCAGCTCGAGCTCTCCTCCGACGCCATCAATAGTTGGGCATCCTCAAAATCCCAACAGTATCCTGTCAAAATGCAGCTACCCAGCAGTTCCTTCATCCCCACCATCAATGCCATCACGTCCAGTCAGGAGCTGCAGTGGATGATCCAGCCAGCCATTCTAGCCTCCAAGCCTGGCCACTGCCTACCCTCTCACCCCTACCAGCCCCTGGACATCAGCAGTAGCCTGGGGCCTGGGAGCCACACAAGGCTCGGGGTAATACGGACAGTGGGCAACACGCATGGAAGGAGCAGGCGTAGTGATCAGTTGAACCCAGCTGAAGAGGATAGGAGAAGgttgaggagagaaaggaacaagCTGGCTGCTGCCAAGTGTCGCAACCACAGGAAGGAGCTGACTGACCAACTGCAAGGAGAGACTGATGAACTGGAGAGAGAGCAGGCCTGCTTGAAGACCCAGGTTGAGAGGctccaggaggagagagagaagctagaGCGCATGTTAGTGTCGCATGCCGCAGTGTGTCTACTGGGCTGTGACGGCCATCCCCAGGCCCAGCCACTGCCCCCTCCTGCCCCGACCATGTACCCCACAGCCACCtcccccctggccaaacccctGAGCCCCCCTCCCGCGATAAAGCAGGAGCCTCAGGAGGAGATGCTGTTCTCCTTTCACCACCATGAACACTGCGCCATCAAACCCACCTATCGCCATGTAGAAGAGTACTGTCCCAGTGTCGACAGCTTCACCACCCCGTCCATGGTGAGCTGCAGCCCAGCCCGTTTGGTGGATCTATCCTGTCCCATGCGGTCTCACCATCACCCCAGCCTGGGTGGGCAGGATAGGTCATTCCGGGAagaggcccttcccaacaacttGCTCTCCAAGCCTCTCCCTGGTAGTGACATGAGTCTTGAGGATGGACTACTGGGACCACGATTCTCCCCCAACTTGTTGACTCTGTAAGGCAATGATTTACAGTAAAGTGGACAAATATAATGTACAGCGCTGTACTGTACTTTAATCACTATGGCATGTTCAGATGTTCAGCTATTCTTTGAAATACTTGACCAGCAACTGATTTGGTCTGCCTGGtataatggaactaatggaattGTCCCAAAAGTACAAACTCCATgctaaggcctagattcaatcagatcgagTGTTAAACTGTGATAGCAGACACACGAATAACAAATGTTTTTGCTGTCAGAGGTGGAACTGCGTTTGAGCCATCAAATCGGTGAGTAGCTGCTCTTGCAATCATTGTCAAGAAGCCACATCTGTCCCCACTCGCTTTGGAAGTTCAGAGCGAGAAAGTGTAGCCTATATATAAATAATTACGCTCAAATTGAAAAATAATTAAACTATATAAagaggatttctatcagcctatTTGATGTGTAGAttccatctcacattccagtgttctaaCTTGGAACAAGGCTGCATGTGATTTCTGTTAATGTGACTGTGAAGCTAATGGCAATatccgctttaggtataatgcctgGAGctacttgtggatttgacagctctaacagcagttccacctctgacaccaccaaaacaaccgCAATACTGATGTCACTAAAGCGGTTCTGATTGAATAGAGCACTTTCTCAAGCACAGACTAGGCTATAGTATACTGTCAAGTATCTAAAAGTTTGACATGTGTATTTTACTGAGCTCTGGAGAGGATTCTTCCCTTGTAAGAGGAAGATAAAGGTTTAACTAGATATTCTTTGTTAATCAGAAATTAACATCACAATTCCTTTACAAGTTTGGCTCTTGTCAATACTTCAATCATATCCATTTTCAAACTGAAAATCGATTGACTGGTAGTTTGGTTTGTTAGACGCTAGATGGTGCTGCAAGACATTGCCTTGGCACAACTGTAAAGCACTACTGTAAATCACAATGGCAAATATTTATTAACCATTAGTTCTGTTTAgtatttaattatttaattgcTGTGCCATTTATTAAAGCCAATCTGTATGTAGAAGCCATTTTATGATTTTAAGTTGGAATAATGAGTTGTCACGACAATACTGACACATTTTCTACAGTCAAATGTGATATGAACACAATGCAAACATTACTTACCATACATCTGAGGTAGAAGTGTCATAGCAATATTGTCATCCACAATTATTTGCTATAATGTTGACCTTTATATTTATCTCATATTGTGTGTTATTCATTCTTGACGGTTTTCATTAGGTTTCAATGTATTATTCGAGGCAGTACAATATATTAATAGGAAGAGTATTTGTTGTATAGTTTGCTGTGAGAAACATATTTTAAAATATGAATTGCTGGCAGTATGATCATAATATATAAGACCTCTCTAAGTATACAGACTCTGGGGACAAAACgttatctacagttgaagtcggaagtttacatacaccttagccaagacatttaatccaagtaaaaattccctgttttaggtcagttgggatcatttcaaga

Function

NR:

description
fos-related antigen 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021600978.2 True 2940 mRNA 0.44 4 34129848 34133896

Neighbor

gene id symbol gene type direction distance location
LOC110522527 LOC106608180 coding upstream 455937 33669172 ~ 33673911 (+)
LOC110522526 LOC106608180 coding upstream 473273 33654060 ~ 33656575 (+)
LOC110522524 LOC106608181 coding upstream 482416 33645228 ~ 33647432 (+)
LOC110522523 LOC106608181 coding upstream 493354 33633190 ~ 33636494 (+)
LOC110522521 NA coding upstream 543462 33584945 ~ 33586386 (+)
LOC110522532 LOC106608175 coding downstream 34354 34168250 ~ 34200246 (+)
LOC110520988 LOC106571729 coding downstream 92557 34226453 ~ 34229272 (+)
LOC110522534 LOC106608173 coding downstream 184617 34318513 ~ 34338873 (+)
LOC110522535 LOC106608172 coding downstream 223194 34357090 ~ 34364255 (+)
LOC110522536 LOC105024319 coding downstream 256973 34390869 ~ 34394175 (+)
G345513 NA non-coding upstream 12042 34117482 ~ 34117806 (+)
G345507 NA non-coding upstream 17544 34111940 ~ 34112304 (+)
G345450 NA non-coding upstream 61815 34067733 ~ 34068033 (+)
G345433 NA non-coding upstream 71039 34056444 ~ 34058809 (+)
G345407 NA non-coding upstream 105922 34023664 ~ 34023926 (+)
G345584 NA non-coding downstream 79785 34213681 ~ 34213880 (+)
G345593 NA non-coding downstream 89320 34223216 ~ 34223535 (+)
G345598 NA non-coding downstream 96866 34230762 ~ 34231004 (+)
G345610 LOC106608174 non-coding downstream 121117 34255013 ~ 34257193 (+)
G344647 NA other upstream 575845 33552127 ~ 33554003 (+)
LOC110521085 LOC100380634 other upstream 640064 33469529 ~ 33489784 (+)
G343958 NA other upstream 1425477 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 2343642 31785865 ~ 31786206 (+)
LOC110522530 LOC106608164 other downstream 403105 34536950 ~ 34541410 (+)
LOC110522546 LOC106608201 other downstream 686546 34807607 ~ 34831281 (+)
G346334 NA other downstream 940043 35073939 ~ 35074338 (+)
G347151 NA other downstream 1699473 35833369 ~ 35833844 (+)

Expression


Co-expression Network