XLOC_022466


Basic Information

Item Value
gene id XLOC_022466
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 31420811 ~ 31423522 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045034
TGTGGAATCATTTAATGAAAGTGTGGGAGAAACGAAGCAAGGCGCGATATAATGAACAATACGTGAAAAGAATGAAGGCTgtaggttttgacatcaaatactgattcAGGAGCAGTACACACGATGAGGCGTGGAAACACATCTTCATGCAGGTTGATGTCTCAAAaaatgtttcccagtcatgggttgcagctggaagggcatctgagtaaaacatatgctggaatagttggcggttcattccactttggcaacTCCTGATAATCAGGGAATAAGCTgatagaaaatgaataaattaatgactcAAAATATAGCCTCCTGTAGATTTGTTTAGGCGCAATTTCCAATGTAttctaataattaaacaaaagtgTGACTATTTTGTCAGCATCATTTAACATTTCCAAATGTCCATCCCCACAATAAGTGCTTTAAATGTTATagtatatttagaataaaaaagtataaaacaaactgaaattatAATAACACTcagtatataactatataactttaATATAACACTAAAACCTTTTGAGTTGAATAAAGAATGTATTAAAGTTTGGTGTCCTGTGTGATATACATCATACAAATACTCCAAGCAAATACAACTCCAATCATGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045034 True 623 lncRNA 0.34 3 31420811 31423522

Neighbor

gene id symbol gene type direction distance location
XLOC_022465 CR759830.3 coding downstream 17103 31401819 ~ 31403708 (-)
XLOC_022464 lca5 coding downstream 20019 31380607 ~ 31400792 (-)
XLOC_022463 hmgn3 coding downstream 48004 31358088 ~ 31372807 (-)
XLOC_022462 phip coding downstream 74424 31276162 ~ 31346387 (-)
XLOC_022461 NA coding downstream 154190 31253300 ~ 31266621 (-)
XLOC_022467 zgc:153284 coding upstream 2971 31426493 ~ 31436524 (-)
XLOC_022468 eya4 coding upstream 16191 31439713 ~ 31512497 (-)
XLOC_022469 tcf21 coding upstream 130747 31554269 ~ 31555696 (-)
XLOC_022470 slc2a12 coding upstream 184737 31608259 ~ 31633310 (-)
XLOC_022471 sgk1 coding upstream 216717 31640239 ~ 31693309 (-)
XLOC_022458 NA non-coding downstream 499800 30906424 ~ 30921011 (-)
XLOC_022453 CR456642.2 non-coding downstream 722124 30517199 ~ 30698687 (-)
XLOC_022454 CR456642.1 non-coding downstream 812710 30607983 ~ 30608101 (-)
XLOC_022451 NA non-coding downstream 1361635 30054434 ~ 30059176 (-)
XLOC_022472 BX927365.1 non-coding upstream 269846 31693368 ~ 31717710 (-)
XLOC_022474 BX927365.2 non-coding upstream 331230 31754752 ~ 31754868 (-)
XLOC_022480 NA non-coding upstream 583383 32006905 ~ 32007796 (-)
XLOC_022482 NA non-coding upstream 687796 32111318 ~ 32141320 (-)
XLOC_022484 CU469363.1 non-coding upstream 716321 32139843 ~ 32139958 (-)

Expression


Co-expression Network