LOC110522538 (stxb6)


Basic Information

Item Value
gene id LOC110522538
gene name stxb6
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 34429884 ~ 34436250 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021600988.2
TCTAACTTGTTCAAATGGGATGGTCTCCAGACAGAGTCACCTTCTCCGCAATGCTCTAGAGTAGAAATTTAACTCGGATTGTAAACCTTGTGGCGGTTGATTAGAGGTGGTAGCCTGACAGTTATACAAGCCAGTCGAGTCGTTTGGTAATCAGCCTAGCTGTTTCTGCATCTTGGTGGAGTAAAACAACAAAAAAGATCACTATGAATATCCAGTCAGTTATCAACAGGGAAGTGTTTGCCCCCCGGGATGAGAGGATACTAGTGGCTGTGGAGGTTAAGAGGAGAAAAAGGAAAAAGGTTCCCTTTCTGCCCACTGGAGGCAAGGGAGAATATATGACATACATCTGTCTGTCAGTGACCAATAAGAGACCAGCCCAGCTCCTCATCACCAAGGTCAAGCAGTTTGGAGGCTCTGCCCCCTTCACCAGGAGGTCACAGTGGAGCGTGGAGCAGCTCCGCCAGGTCGATGGCATCGACCCCAACAAGGACTGCCCAGAGTTTGACCTGGTATTTGACAACGCATTTGACCAATGGGTGGCCAGCTCAGCGGCAGAGAAGTGCATCTTCATCCAGATCATGTACCACGCCTGTCAGACTTACTGGGAGGGCAAGGAGCGGGTCCCTGGTGGCCTGGGTAGCCCAGCTGGAGACCAGCAGAAGGACCAGAGAGCTAGtccaggggcaccggttagccCAGGATTCCAAGGGGGCCAAAGAGGAGGTCCAGGGGCCCAGGCTAGACGGAAGAGCACAGTGGGTCCCAGGCCCCGCCAGACTGAATTTGTCAACTGTCAGTCCAAACTCACAGGAGATGCCTGCACTGTGAATCTGGTCATCTACCGTTGCAAGGTCTTCTTCAACCGCGTGAAGAAGGTGATGGCTTCAAAACAAAGCAGTCCTCAGGCTGGAGcAGGTCACAGAGCAAGTCCCAGTGGACAGCGCCCCCCAGGGGGCAGTATGGCTAGTGTAGTCAAGAGGGCAAGCCAGGCCCTGCAGGAGCGTGGGGAGAGACTGGGCCGTGCCGAGGACAAGACAGTAGACCTGATGCACAAAGCCCAGCAGTTTGCAGACACTGCCCACAAGCTGGCTCTGAAGTATTCAAACTAGAGGCATCTCTTCCTGTGGGTCTGCTCCTGGAGTCCGTGGCCCTATTTCACCTGTTGATTCTATGGATTGTAACTTCTATACTAATGTTGTGCTGAAGCATAGTTTAGTTGAAACCCAGTGGACGCTGCAATTCCTCTGTGAAGAATCCTATGTTCtgagaggagtggagggttgtGGTACTTGCTCTTAGGACATTGACTATGTCAAAAGGACATGGAAACCTTTACAGACGGGCAGTGGGGAGGACGTTATGGAGTTAGTTATGGACCTCAGAGTTTAAGAATGACCTTTAACCTCCAGAATGGGACCTGTGGATCACATGACGGTGTCGTTTCATGGCATAGCTAGCTGGTTTACTGGATGGCCACGTTGTCACAATGCTCCCACTGCATGAGTGTACTTGTCTTCCCTGCTTCAGTAGCCTGTGCTCTGATGACGAGGACTTTACATTTTGGGGGTTTCacatgtttttagatattttaaTATTGGCATATGAATTCTCCGTAAAAAGCTTTTCAGGATTAACGTGTCTTCTCCGCTATGGAAGTATATTTCAATGGTGGTTTTGCTCGTTACATAAATAATTGATCATTTATGACCGTAAACAGGCACAGGCATATAGAGCAGCTGGTGAATGTTTGACTTAGATTGATACTGGAGAATCCATTTTACCCATGGGAGGGGTTACCAATTACATAGTCATTTAATGTTTGAATGgtgttgtatgtatgtatgtatgtatgtaagtgGCTGTTTCAGGTTTTTGCCTTAGTTTTGTGTTAGCTGGTGCAGGGGTATGAGGAACACCTggtgaaatgtttttttgttttctttgcaTGGTGATGCTTTAGTAAGTATAGTCTTGATTTCTTGGCACTTTCTAAATATGACTATTGTATGGATTCCTATATTGCACAATAATTGGTTTTGCTTTAATTTTTTTCTATTTTTCACTGCTAAATTCCTCCACTACCCTCTCCCTGCTTGCATCATCCATTGATTAGTCACTAATCATTATTCAAACCATTGATTAGTCACTAATCACTATTCCAAATTCAAGTTGATAATCTATCTGATCCTTGTCTATTGTCTTTGTCTAATCATGTGTGAGTCATTGATCCCCGGTCTTGTCACGTATGTGTCGTGTGTTTTTGTCTGTTGCACCATGTGTATCGTAATTACATGTCTCATGACCTTTTAATCTTTAATTGCTGGTTCCGTGTCGGAGACTTGAGTGCAGCTGGTATAATGGTGGGTTTGTGTATGTAGACCAGGGCTCTTCTAGGTGAGGTTGTAAGCAAGATATGGAATGTTGACTGAAGGATTGCGTGTGTGAGCATAATCTCGTCCACACAGCCGGCTCTCTATGTGGTAGCAATTGAGCCTGGGGACGAGGTTCATGTGATGACGGTTCAGAAGGCCACTGCCGAGAAGAGACTTCTGAGTTGGTGAGTGATGAGGGTCACAAAGGCTTGTTGTAAGGTTGAGTGCTCTTGCGTAGGCCTGTGGTTGTTGAATTTCTTTCGATACCTAATAGTGTTTTTATTGTACACAAcactaataaataaataaagcataTCAATTTATCAGCTGGGACAACATGTCCCACTTCATGCTTAACCTGTCATGGAATGAGAGGGAAGCCTAATCTGTCTTTCAACTACTCGTATCTGAATGATACTTAATTGTGGCAGTTAACTAAGGAGACAAATCCTAAAATGGCACTGCATGCTTTctgttgctatattactgttgGTGATCTGATGAACGATTGGCTAGAATCTAGATGAGTTGATAAGTGCCTAAACTACCTTTTTTTTATATTCTGATCATGGAGTTGAAACCATGAACTGATGTTATTCCTAGAAATGCTGACTATTTAACATAGTCTTAGAACAGTTCTTGAAGCTCTGTTTAGTGTCAATGTTCACATGAGATTTGTACTGTTTTTAATGAGAACTTCAATGACCTTAACACCTCTTTTTGACCCAATAAATGAAATGGGACCTGTCTGA
>XM_021600990.2
GTGACTTCTAACTTGTTCAAATGGGATGGTCTCCAGACAGAGTCACCTTCTCCGCAATGCTCTAGAGTAGAAATTTAACTCGGATTGTAAACCTTGTGGCGGTTGATTAGAGGTGGTAGCCTGACAGTTATACAAGCCAGTCGAGTCGTTTGGTAATCAGCCTAGCTGTTTCTGCATCTTGGTGGAGTAAAACAACAAAAAAGATCACTATGAATATCCAGTCAGTTATCAACAGGGAAGTGTTTGCCCCCCGGGATGAGAGGATACTAGTGGCTGTGGAGGTTAAGAGGAGAAAAAGGAAAAAGGTTCCCTTTCTGCCCACTGGAGGCAAGGGAGAATATATGACATACATCTGTCTGTCAGTGACCAATAAGAGACCAGCCCAGCTCCTCATCACCAAGGTCAAGCAGTTTGGAGGCTCTGCCCCCTTCACCAGGAGGTCACAGTGGAGCGTGGAGCAGCTCCGCCAGGTCGATGGCATCGACCCCAACAAGGACTGCCCAGAGTTTGACCTGGTATTTGACAACGCATTTGACCAATGGGTGGCCAGCTCAGCGGCAGAGAAGTGCATCTTCATCCAGATCATGTACCACGCCTGTCAGACTTACTGGGAGGGCAAGGAGCGGGTCCCTGGTGGCCTGGGTAGCCCAGCTGGAGACCAGCAGAAGGACCAGAGAGCTAGtccaggggcaccggttagccCAGGATTCCAAGGGGGCCAAAGAGGAGGTCCAGGGGCCCAGGCTAGACGGAAGAGCACAGTGGGTCCCAGGCCCCGCCAGACTGAATTTGTCAACTGTCAGTCCAAACTCACAGGAGATGCCTGCACTGTGAATCTGGTCATCTACCGTTGCAAGGTCTTCTTCAACCGCGTGAAGAAGGTGATGGCTTCAAAACAAAGCAGTCCTCAGGCTGGAGGTCACAGAGCAAGTCCCAGTGGACAGCGCCCCCCAGGGGGCAGTATGGCTAGTGTAGTCAAGAGGGCAAGCCAGGCCCTGCAGGAGCGTGGGGAGAGACTGGGCCGTGCCGAGGACAAGACAGTAGACCTGATGCACAAAGCCCAGCAGTTTGCAGACACTGCCCACAAGCTGGCTCTGAAGTATTCAAACTAGAGGCATCTCTTCCTGTGGGTCTGCTCCTGGAGTCCGTGGCCCTATTTCACCTGTTGATTCTATGGATTGTAACTTCTATACTAATGTTGTGCTGAAGCATAGTTTAGTTGAAACCCAGTGGACGCTGCAATTCCTCTGTGAAGAATCCTATGTTCtgagaggagtggagggttgtGGTACTTGCTCTTAGGACATTGACTATGTCAAAAGGACATGGAAACCTTTACAGACGGGCAGTGGGGAGGACGTTATGGAGTTAGTTATGGACCTCAGAGTTTAAGAATGACCTTTAACCTCCAGAATGGGACCTGTGGATCACATGACGGTGTCGTTTCATGGCATAGCTAGCTGGTTTACTGGATGGCCACGTTGTCACAATGCTCCCACTGCATGAGTGTACTTGTCTTCCCTGCTTCAGTAGCCTGTGCTCTGATGACGAGGACTTTACATTTTGGGGGTTTCacatgtttttagatattttaaTATTGGCATATGAATTCTCCGTAAAAAGCTTTTCAGGATTAACGTGTCTTCTCCGCTATGGAAGTATATTTCAATGGTGGTTTTGCTCGTTACATAAATAATTGATCATTTATGACCGTAAACAGGCACAGGCATATAGAGCAGCTGGTGAATGTTTGACTTAGATTGATACTGGAGAATCCATTTTACCCATGGGAGGGGTTACCAATTACATAGTCATTTAATGTTTGAATGgtgttgtatgtatgtatgtatgtatgtaagtgGCTGTTTCAGGTTTTTGCCTTAGTTTTGTGTTAGCTGGTGCAGGGGTATGAGGAACACCTggtgaaatgtttttttgttttctttgcaTGGTGATGCTTTAGTAAGTATAGTCTTGATTTCTTGGCACTTTCTAAATATGACTATTGTATGGATTCCTATATTGCACAATAATTGGTTTTGCTTTAATTTTTTTCTATTTTTCACTGCTAAATTCCTCCACTACCCTCTCCCTGCTTGCATCATCCATTGATTAGTCACTAATCATTATTCAAACCATTGATTAGTCACTAATCACTATTCCAAATTCAAGTTGATAATCTATCTGATCCTTGTCTATTGTCTTTGTCTAATCATGTGTGAGTCATTGATCCCCGGTCTTGTCACGTATGTGTCGTGTGTTTTTGTCTGTTGCACCATGTGTATCGTAATTACATGTCTCATGACCTTTTAATCTTTAATTGCTGGTTCCGTGTCGGAGACTTGAGTGCAGCTGGTATAATGGTGGGTTTGTGTATGTAGACCAGGGCTCTTCTAGGTGAGGTTGTAAGCAAGATATGGAATGTTGACTGAAGGATTGCGTGTGTGAGCATAATCTCGTCCACACAGCCGGCTCTCTATGTGGTAGCAATTGAGCCTGGGGACGAGGTTCATGTGATGACGGTTCAGAAGGCCACTGCCGAGAAGAGACTTCTGAGTTGGTGAGTGATGAGGGTCACAAAGGCTTGTTGTAAGGTTGAGTGCTCTTGCGTAGGCCTGTGGTTGTTGAATTTCTTTCGATACCTAATAGTGTTTTTATTGTACACAAcactaataaataaataaagcataTCAATTTATCAGCTGGGACAACATGTCCCACTTCATGCTTAACCTGTCATGGAATGAGAGGGAAGCCTAATCTGTCTTTCAACTACTCGTATCTGAATGATACTTAATTGTGGCAGTTAACTAAGGAGACAAATCCTAAAATGGCACTGCATGCTTTctgttgctatattactgttgGTGATCTGATGAACGATTGGCTAGAATCTAGATGAGTTGATAAGTGCCTAAACTACCTTTTTTTTATATTCTGATCATGGAGTTGAAACCATGAACTGATGTTATTCCTAGAAATGCTGACTATTTAACATAGTCTTAGAACAGTTCTTGAAGCTCTGTTTAGTGTCAATGTTCACATGAGATTTGTACTGTTTTTAATGAGAACTTCAATGACCTTAACACCTCTTTTTGACCCAATAAATGAAATGGGACCTGTCTGA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0016192 vesicle-mediated transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021600988.2 False 3124 mRNA 0.45 7 34429884 34436244
XM_021600990.2 True 3127 mRNA 0.45 7 34429884 34436250
Loading

Neighbor

gene id symbol gene type direction distance location
kcnk10a LOC106608174 coding downstream 149668 34254992 ~ 34280216 (-)
LOC110522529 LOC106608176 coding downstream 489651 33749940 ~ 33940233 (-)
zgc:112001 LOC106608178 coding downstream 737526 33690618 ~ 33692358 (-)
LOC110522525 NA coding downstream 787582 33640275 ~ 33643239 (-)
LOC110522520 LOC106608189 coding downstream 839538 33577450 ~ 33590346 (-)
LOC110521086 LOC106608167 coding upstream 4651 34440901 ~ 34455193 (-)
LOC110522539 LOC106608168 coding upstream 23063 34459313 ~ 34463358 (-)
LOC110522542 LOC106608165 coding upstream 38464 34474714 ~ 34478446 (-)
LOC110522545 LOC106608202 coding upstream 194059 34630309 ~ 34682247 (-)
LOC110522547 5nt1a coding upstream 295296 34731546 ~ 34784324 (-)
G345885 NA non-coding downstream 6730 34375128 ~ 34423154 (-)
G345901 NA non-coding downstream 20566 34408758 ~ 34409318 (-)
G345895 NA non-coding downstream 30533 34399107 ~ 34399351 (-)
G345890 LOC107577411 non-coding downstream 37515 34382962 ~ 34392369 (-)
G345889 NA non-coding downstream 39269 34382146 ~ 34390615 (-)
G345943 NA non-coding upstream 90725 34526975 ~ 34527504 (-)
G345956 NA non-coding upstream 98585 34534835 ~ 34535389 (-)
G346064 LOC106608164 non-coding upstream 102265 34538515 ~ 34541396 (-)
G346074 NA non-coding upstream 120421 34556671 ~ 34556875 (-)
G346094 NA non-coding upstream 148294 34584544 ~ 34585357 (-)
G345255 LOC106585892 other downstream 639799 33789494 ~ 33790085 (-)
G345248 NA other downstream 649246 33780297 ~ 33780638 (-)
G344164 NA other downstream 1567780 32841256 ~ 32862104 (-)
G343300 antiprot1 other downstream 2305998 32107969 ~ 32123886 (-)
LOC110522548 5nt1a other upstream 365839 34799157 ~ 34807617 (-)
LOC110522550 LOC106571659 other upstream 396189 34832436 ~ 34886570 (-)
LOC110522554 LOC106608208 other upstream 554694 34989546 ~ 35064960 (-)
G346754 NA other upstream 781074 35217324 ~ 35217782 (-)
G347016 NA other upstream 1115823 35552073 ~ 35552585 (-)

Expression

LOC110522538(stxb6) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 200.
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LOC110522538(stxb6) Expression in each Bioproject

Bar chart with 17 bars.
LOC110522538(stxb6) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 6000.
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Co-expression Network