LOC110522575


Basic Information

Item Value
gene id LOC110522575
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 37038555 ~ 37040052 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002473342.2
TGGCCGAAGTCAGCAAATTGTCTGTGTTATTGAGTTTTCACGCAGAGAGTGAATGAAGATGGCAACCACAAGTAGTAATTCAAACATGAACTGTATGGTGCCAGGCTGTATGAATTGGCTCCAAAAAAATCCCTTGGTAAACTACCATCGACTGCCCAAGGACCCACAACTTTTGTAGAAGTGGCTCCATACCATGAAGAGGAAGGACTTGCTTGAGCTAGCAGGATCTGCAGACAGCTCTTCACGGAGGCAGACTTCGCAATGAAGGGCACTTTCGATGTGGCAACCGGGAGTTTCCGAATGGAAAGCAGTCATCGGACTACGTTGACGCCCTCCGCTTGCGCCTGAGGTAACGTTAACCGGTCATGTGGTTGACTAGGCTAGCGTTAGACACAGGACAACTTTGTTGCAACTCTAATTGAAGgaTGACATCTTCATCCCTGAAAATGTTTTCATCCTGGAGGAGACTGTTCAGGAGGCAAAAGAGgaaagaacagtTAGTACAGCCAAACTGACCCCTGGGTGCCAGAGTGTTTCCTGTGCTGCGGTGGAGAAGCGGTCTACCGGAACCAGCACTAAAGAGCTGGATTTGCTACCGTGTCCCGGTTCTactgtttcgactctctctctctcaacctctagctatgaaaagccaactgaggTGTTgaactgttgcaccctctataaccactatGGTTATTATTTTGATGATAAAAAAAGGGCTtttgtaaaatacatttgattgattggttgattgattgttttCTGTGCTGTATGCTGTGTATTCACTGTCTGAGTGATGGGACATTTTTATAGTATCTGTAACATATTTTGGTGTGTATTAAATCTTCACcttaaagtggcaatcagcagtagaaacaatagcAAAGTCTCTCCCTGCTCCTCTTTGGGTAAAAAGCTGTGGGCTggggaaatgtaaccactctcaaattcatagacagagctaaaAGGACTGAACCTCCATGATATCGCTTCGGATAAAGGAAtcagctaaatggcatatattattaaagTCTACTTTGACTCCCAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106565277 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002473342.2 True 1051 mRNA 0.44 3 37038555 37040052

Neighbor

gene id symbol gene type direction distance location
LOC110522563 LOC106608227 coding upstream 880230 36138956 ~ 36158325 (+)
LOC110522562 LOC105017690 coding upstream 915193 36039096 ~ 36123362 (+)
LOC118964470 NA coding upstream 1154315 35883168 ~ 35884241 (+)
LOC110522558 LOC106571671 coding upstream 1219247 35803948 ~ 35819308 (+)
LOC110522555 LOC106608214 coding upstream 1277296 35732092 ~ 35761259 (+)
snw1 LOC106608236 coding downstream 112972 37153024 ~ 37167042 (+)
LOC110517371 LOC106571681 coding downstream 147958 37188010 ~ 37226273 (+)
LOC110522567 LOC106608238 coding downstream 231121 37271173 ~ 37283482 (+)
LOC110522568 LOC106571107 coding downstream 244209 37284261 ~ 37402023 (+)
LOC110522576 LOC106608246 coding downstream 405316 37445368 ~ 37501952 (+)
G347974 NA non-coding upstream 189366 36848410 ~ 36849189 (+)
G347960 NA non-coding upstream 203282 36819668 ~ 36835273 (+)
G347929 NA non-coding upstream 256306 36726319 ~ 36782249 (+)
G347939 NA non-coding upstream 283938 36753921 ~ 36754617 (+)
G347912 NA non-coding upstream 339390 36698235 ~ 36699165 (+)
G348084 NA non-coding downstream 33211 37073263 ~ 37077812 (+)
G348131 NA non-coding downstream 117025 37157077 ~ 37157482 (+)
G348141 NA non-coding downstream 136305 37176357 ~ 37176560 (+)
G348143 NA non-coding downstream 139908 37179960 ~ 37180161 (+)
G348145 NA non-coding downstream 141137 37181189 ~ 37181392 (+)
G347178 NA other upstream 1130104 35908246 ~ 35908451 (+)
G347151 NA other upstream 1204711 35833369 ~ 35833844 (+)
G346334 NA other upstream 1964217 35073939 ~ 35074338 (+)
LOC110522546 LOC106608201 other upstream 2216373 34807607 ~ 34831281 (+)
G348133 NA other downstream 120042 37160094 ~ 37161123 (+)
G349855 NA other downstream 1364593 38404645 ~ 38405464 (+)
G349877 NA other downstream 1392127 38432179 ~ 38434024 (+)
LOC110522591 LOC105024333 other downstream 1850331 38890314 ~ 38897681 (+)

Expression


Co-expression Network