LOC110522584 (LOC106608258)


Basic Information

Item Value
gene id LOC110522584
gene name LOC106608258
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 37897636 ~ 37899208 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601035.2
AGCAGTTTGTTTTGCCTCTTCCAAGAAGACATCATACAGAAATACTTCTACTTAACCAATATCTTACTTCCAGCAGGGAATCCAGCAGTTTATTCCAAACACTTACATCTAAACCAGGAGTGCTTCTGTTGTGTGGAGATTGTGTAGGACACAGGATGAAGATCTCAACAGTATTTGCCTCGGCCATGGTGTTGGGACTACTCTTCTGTCCGCTGAGGAGCGCAGCGGTAGGTGGCTACCAGGGCGCCTCTCCGCACCCATACAAATACAACTCCAACCCCAACGAGTCGGAACGCTTACCGCAGCAGCCACCACAGAACGGATTTGTCTCCCGCCAAATGGGGCCAGTAACGGCCGCTGACGAGGTTCTAGAATCCAGCCAAGAAGCCCTACACGTCACGGAGCGCCGGTACCTCAAACTGGACTGGTGCAAGACTCAGCCGCTGAAACAGGCGATCCACGAGGAAGGATGCCTCAGCCGCACCATAATCAATCGTTTCTGTTACGGGCAGTGTAACTCATTTTACATCCCCCGACACATCTACCAAGACGATGGGGCTTTCCAATCGTGTTCCACCTGTAAACCAAAAACATTCACTACCGTCACCTATACCCTCATCTGTCCAGGCCGGTCACCCAGCACCCAGAAGAAACGCGTCCAGCGCGTGAAGACTTGTCACTGCGCTTCCATAGACCTGGATTAGTTAAAACCAGAAGGAATGGACACAGTTCCTATAGTCTGTGTTGATTTGCTTTCCACTGGAATAACTAAAAGGAATAGAGCGAGCGACCGACCAAATGCGTTAAATCCAACGTGCTTCCATTGCAAAAAACCGAATATGCACGAGGGAGAAAATATCCAATCTTAATCCTAAAAGAGGAGATCAAAAGAAAACGAAAACAAGGGAACTCTTCACAACCATGCAAAAAGCACTAAACGGTTAGCAATGCCAACTCCAACAGACCCCCACCCCAGTGTAATGTATGGGACTATAACGACTGATTTGGCATTATTGACTGGTTTAGCACATTGTAAATGGCTTATAGCTTCGTGCTTAATTATTTTTAAATTTTGCGCATAATACAAATAACAGTATGTCTGTGGAGACCAGAATGTTTGCGCATGCATGGCATTTAAATATGGAGAAAAAGCCACACAATGTGTTCAATTTGACATGGACTTGTTAACTGTTACGAGCCAACGTGGACTCGTTAACTGTTATGAGCCAACGTGGACTCGTTAACTGTTACGAGCCAACGTGGACTCGTTAACTGTTACGAGCCAACGTGGACTCGTTAACTGTTACGAGCCAACGTGGAGAGAATAAGCATTGTTTCCCTtt

Function

NR:

description
gremlin-1-like

GO: NA

KEGG:

id description
K23318 GREM; gremlin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601035.2 True 1343 mRNA 0.47 2 37897636 37899208

Neighbor

gene id symbol gene type direction distance location
LOC110521098 LOC106608260 coding upstream 112 37879402 ~ 37897524 (+)
actc1a LOC105024319 coding upstream 19118 37870752 ~ 37878518 (+)
LOC118964471 NA coding upstream 42607 37847979 ~ 37855029 (+)
LOC110522574 LOC106608248 coding upstream 373568 37522809 ~ 37524068 (+)
LOC110522576 LOC106608246 coding upstream 395684 37445368 ~ 37501952 (+)
LOC110521100 LOC106608253 coding downstream 70514 37969722 ~ 38234678 (+)
LOC110522580 LOC106608254 coding downstream 388989 38288197 ~ 38291538 (+)
thbs1b LOC106608163 coding downstream 727008 38626216 ~ 38651062 (+)
LOC110522590 NA coding downstream 918692 38817900 ~ 38820524 (+)
LOC118964474 LOC106608159 coding downstream 926575 38825783 ~ 38885772 (+)
G349315 NA non-coding upstream 47059 37850301 ~ 37850577 (+)
G349275 NA non-coding upstream 76201 37775498 ~ 37821435 (+)
G349296 NA non-coding upstream 83920 37813187 ~ 37813716 (+)
G349286 NA non-coding upstream 104061 37792057 ~ 37793575 (+)
G349263 NA non-coding upstream 133341 37763843 ~ 37764295 (+)
G349367 NA non-coding downstream 55034 37954242 ~ 37955404 (+)
G349404 NA non-coding downstream 120635 38019843 ~ 38020608 (+)
G349405 NA non-coding downstream 123893 38023101 ~ 38023738 (+)
G349416 NA non-coding downstream 149522 38048730 ~ 38049008 (+)
G349417 NA non-coding downstream 151149 38050357 ~ 38051159 (+)
G348133 NA other upstream 736513 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 1824680 36039096 ~ 36123362 (+)
G347178 NA other upstream 1989185 35908246 ~ 35908451 (+)
G347151 NA other upstream 2063792 35833369 ~ 35833844 (+)
G349855 NA other downstream 505437 38404645 ~ 38405464 (+)
G349877 NA other downstream 532971 38432179 ~ 38434024 (+)
LOC110522591 LOC105024333 other downstream 991175 38890314 ~ 38897681 (+)
G350211 NA other downstream 1004522 38903730 ~ 38904774 (+)
G350665 NA other downstream 1488933 39388141 ~ 39389474 (+)

Expression


Co-expression Network