rgs6 (LOC106571069)


Basic Information

Item Value
gene id rgs6
gene name LOC106571069
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 39222711 ~ 39384500 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976254.1
gagagagagcgagagagagagagaaagagagaaagagagagagagagagaaagagagagatagagagagacagagagagagagagcgagagagaggggggaacgcTACACCCTCCCAGCAGCTGTCTCTGATCCAACATCTGTGTACGTTGctttttcttctccttctcctgttctctccatccatccttttGACTCGCTCCTCAAGCCAATTAGATCATGAACATGCTGTGTGCTTGTTGCTAAGGGGGGGAAGAGAACCAAGAAGAGTGGACCAGCCGATACTTTGTTGCTAAGCCTCCAGTGACAGAAGAAGAAAGAGTGCAAGAGAACAACGGAGagggactgaaagagagagagagagagagagagagagagagagcaaaggataAAGAGAACAAGAGAAGACATCAGTCAGCTACAGTATGAACCAGTCCAGCCAGGACCCGAGTGGAGTGGGGACAGCAGACCCCGATGAGGAATCTCCCAACATGATCGTCTACAGAAAGaTTGAGGAGATAGTGACCAGTATCCAGGATGAGACTGAGGGCGTTCCCATCAGAACTGTCAAGAGCTTCCTGACCAAGATACCCAGCGTCGTCACAGGTGCGGACATAGTACAGTGGCTGATGAAGAACCTAGCCATTGAGGATCCTGCTGAGGCGATGCACATCGGGAGTCTGATTGCTGCTCAGGGATATTTCTTCCCCATCTCTGATCACGTCCTGTCACTCAAAGATGATGGATCCTTCTATCGCTTCCAGGCTCCATATTTCTGGCCTTCTAACTGCTGGGAACCAGAGAACACAGATTATGctatcTATCTGTGCAAGAGGACCATGCAGAACAAGACTCGTTTGGAGCTGGCTGATTATGAGGCGGAGAACCTAGCCAGACTACAGAGAGCCTTCACTAGGAAGTGGGAGTTTATCTTCATGCAGGCCGAGGCTCAAGTCAAgATCGACAGGAAAAAGGATAGAATTGAGAGGAAGATTCTAGATAGTCAAGAAAGAGCTTTCTGGGATGTCCATAGACCTgtgCCAGGTTGTGTGAACACCACAGAGTTGGACATCAGGAAATGCAGACGCATGAGGAACCCACAGAGAGTCAAGAAGTCAGTGTATGGTCTGATAGACGAGGGTCAGTCTCAGAGCCCTGTACACACACCATCACAAATAGCCAGAAAAGGCACCAAAGCGGACGTGGAGAAAGAGATTGTGTTTCTGAACAGCCAGTTGGACCGACACTGTATAAAGGTTTCTAAAGTCGCTGAGAGTCTAATGAGTTACACAGAGCAGTACCAGGAGTATGACCCGTTTGTGATGTCACCAGAACCTTCCAACCCCTGGACCAGTGACGACCTCTCATTCTGGGACCTGGAAGCCAGtaAGGACCCCAGTCAACAGAGGGTGAGGAAGTGGGGTTTCTCTCTAGATGAAGCTCTGAAGGATCCGGCAGGACGAGACCAGTTCCTCAAGTTCCTGGAATCAGAGTTCAGCTCAGAGAACCTACAGTTCTGGTTGGCGGTGCAGGATCTGAAGAGGCAGCCCCTGGAGAACGTGGCAGAGCGGGCTCAGGAGATCTGGACAGAGTTTCTGGCAGAAGGCGCTTCCAGCTCCATCAACCTGGACTCACACAGCTACGAACGCACCAGCGCCAACCTTAAAGACCCGGGACGATACAGCTACGAAGACGCACAGGACCACATCTATAAGCTGATGAAGAGTGACAGCTACACACGGTACCTGCGCTCCAACGCTTACCAGGAGCTGCTGATGGCCTGGAAgaagCCTGAGACGGAGCAGCAGCAGGGAAGACGCACCTCTCTGGAGAAGTTTACACGCAGCGTGGGCAAGTCACTGACGGGCAAACGGCTGACAGGCCTGATGCAGTCGTCCTGACCAGGCCTGGGGCTGGAGTAAGACAGCCATGCCCAGATGATCTGCTCTGCTGTGGGGAGAGGGCTAGATGTTGATGCTGAGAGGCCTAACTGGGGCCTGGACACAACGTCATCTACATAACTGACTCCAGATCAGTTCCCTGAGCTCCAGTGGAGGACAGACAGCATGCAATAGGTCACCTAGATCTGATACGGGGACAGTGCTGTCTTTGTCTTTTTCTCAAAtgtcactctattccctatatagtgtactacttttgaccagagccctattttgACTAGTttgtccatagggctctggtcaaaaggtgtgcactataaagggaatagagtgacATTTGGGAGGTACATATTGTGTAGTCTATCGACATATAACTCTATCCAATACTCTCTGTCTTACTTAGGTTCCTTTAATCGATTCTAGAACCAAATGGAATGTTATATAACTCTATCCAATACACTCTGTCTCACTTAGGTTCCTTGAATCGATTCTAGAACCAAATGGAATGTCATATAACTCTGcctgctactctctgtctctcttaggtTCCTTTAATCGATTCTAGAACCAAATGGAATGTCATATAACTCTGcctgctactctctgtctctcttaggtTCCTTTAATCGATTCTAGAACCAAATGGAATGTCATATAACTCTGcctgctactctctgtctctcttaggtTCCTTTAATCGATTCTAGAACCAAATAGAATGTCAGACTTGTTCTACTCTAGCTCGGCTtatattactacagtataataGCTTATTGTAACGATTACACAACTCTTTTGTTCAATGACAGAAACATTAAAATGCTTAAAACTTGGA
>TU396791
gctctggtcaaaaggtgtgcactataaagggaatagagtgacATTTGGGAGGTACATATTGTGTAGTCTATCGACATATAACTCTATCCAATACTCTCTGTCTTACTTAGGTTCCTTTAATCGATTCTAGAACCAAATGGAATGTTATATAACTCTATCCAATACACTCTGTCTCACTTAGGTTCCTTGAATCGATTCTAGAACCAAATGGAATGTCATATAACTCTGcctgctactctctgtctctcttaggtTCCTTTAATCGATTCTAGAACCAAATGGAATGTCATATAACTCTGcctgctactctctgtctctcttaggtTCCTTTAATCGATTCTAGAACCAAATAGAATGTCAGACTTG

Function

NR:

description
PREDICTED: regulator of G-protein signaling 6-like

GO:

id name namespace
GO:0043547 positive regulation of GTPase activity biological_process
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0005834 heterotrimeric G-protein complex cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005096 GTPase activator activity molecular_function
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976254.1 False 2735 mRNA 0.48 18 39222711 39384500
TU396791 True 366 lncRNA 0.38 2 39383959 39384395

Neighbor

gene id symbol gene type direction distance location
LOC110521105 LOC106571085 coding upstream 35847 39035394 ~ 39190157 (+)
LOC118964499 NA coding upstream 109364 39112723 ~ 39113347 (+)
LOC118964477 NA coding upstream 226958 38994685 ~ 38995753 (+)
LOC110521104 LOC106608154 coding upstream 228153 38960535 ~ 38994558 (+)
LOC110522592 LOC106608157 coding upstream 280699 38921338 ~ 38942012 (+)
pigh pigh coding downstream 88808 39473308 ~ 39478404 (+)
vps18 LOC106608270 coding downstream 143927 39528427 ~ 39562620 (+)
ino80 ino80 coding downstream 179079 39563579 ~ 39651706 (+)
syndig1l LOC106608262 coding downstream 797877 40182377 ~ 40268661 (+)
LOC118964479 NA coding downstream 927138 40311638 ~ 40312681 (+)
G350594 NA non-coding upstream 7348 39214912 ~ 39215363 (+)
G350586 NA non-coding upstream 22233 39200079 ~ 39200478 (+)
G350585 NA non-coding upstream 30069 39192388 ~ 39192642 (+)
G350505 NA non-coding upstream 49771 39172553 ~ 39172940 (+)
G350665 NA non-coding downstream 3641 39388141 ~ 39389474 (+)
G350664 NA non-coding downstream 5103 39389603 ~ 39391386 (+)
G350674 NA non-coding downstream 27329 39411829 ~ 39412089 (+)
G350688 NA non-coding downstream 57938 39442438 ~ 39442674 (+)
G350708 NA non-coding downstream 90699 39475199 ~ 39475688 (+)
G350211 NA other upstream 317937 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 325055 38890314 ~ 38897681 (+)
G349877 NA other upstream 788687 38432179 ~ 38434024 (+)
G349855 NA other upstream 817247 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 1725705 37445368 ~ 37501952 (+)
G351441 NA other downstream 750187 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 1605659 40990159 ~ 40990505 (+)
G352340 NA other downstream 1825747 41210247 ~ 41210998 (+)
G352341 NA other downstream 1826613 41211113 ~ 41214206 (+)
G350503 NA non-coding upstream 216804 39166348 ~ 39167155 (+)

Expression


Co-expression Network