paqr8 (paqr8)


Basic Information

Item Value
gene id paqr8
gene name paqr8
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 40626393 ~ 40630821 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124651.1
ACGAAATCGATGTAGAAATGAAAAACGATGTGGAGGGGGGTCTAGCGCTGTAGCGGTATTTGATAACTGCGACGGCTCCCAGCAACAGGTGTGTTCTGTCTAGACATTCAGGAACATACAGAAAGACAGCAAAACCCAAGTCTTCCCAAATCAACTTTCCACCCTACTCCTCTTCTATACCCATTCCcacctctttccctccatccctctttccttccctcgcCCCACCTCTCCATCATCATGACCAGCGGAGCCCTGGGGCGTCTCAGTACCTTGACTCTGAGTGTGAAGCAGCTCAGCCGGCTGCCTCACCTCTCCGACGTCCTCCCCTcttcactcccctccctcccctcccccagccCCACCGTCCCTGTCTCCTGCGTCCCCACTCTGTTCCAGGAGCCTTACATCCTCTCTGGCTACCGCCCGGTTGGGCAAGACTGGCGCTGTTACGTCCTCAGCCTCTTCCAGAGACACAATGAATCCCTCAATGTCTGGACACACCTTCTGGCAGGTCCCCTGGTGCTACTACGCGTCTGGGCCTATGGATTGTCCCTAGACTCGGCgtccctgcctctctgcctgtacATACTGTCTGCCCTCACCTACTTGTGTTGTAGCGTAGCAGCTCACCTGCTTCAGTCCCACTCTGAGCTGGCCCACTATACTCTGTTCTTCCTGGACTAcgtgggtgtgtctgtgtatcaGTATGGCTGTTCGCTGGCTCACTATTTCTACTGCTCTGAGCCAGCCTGGAGGGAGAGCCCCGTAGgGTTCTGGTTCCTCCCTGGCGCTGCCTTACTTGGCTGGCTGTCCTGTGCTAGCTGCTGCTTTGCCAAGTCACGCTACCGCCGGCCTTACCCGCTCCGGAGGAAGATCTGCCAGCTGATCCCCACCAGCATGGCCTACTTCCTGGACATCAGCCCTGTAGCCCACCGCCTGGCTACCGTACCCTGGGGTCAGGACCCCGCTCTACCGCTCCACGCCCTGCAGATGGCCGCCTTCCTGCTTGCAGCCTTCTTCTTCTCCTGCCCTGTTCCTGAGAGGTTCTTCCCGGGGCATTGTGACATCATGGGTCAGGGTCACCAGATCTTCCacctcttcctgtctctgtgtaCGCTGTGTCAGCTGGAGGCCCTTCCGACTATGGCAGTCGGAGGGTACAGTGGCAGGTATGGGGAGAGGCAGCTGTGGTTCGCCGGTGTATCCTTCCTCGCCCTGGCACTATGTAGCACCCTGACTGCGGTTGTCATGAGGAGGCATGTACAGAGACGACTGGAGAAAAGTGAAACTGTGAAACAGTGAGGAATGGCAGggagaggaagaacgagagacaTGTTCAGTGTTTTGAGAATAATCATGTCCTGTAAATGTATAGAGAGACAGTATTTATCTAAGATGATGAGCATCTTTGTAGCAGATAAAGGTTTCTTGCCTTAAAAGATCATTTGATTCCTGTACAATCTAACCATGTCCTTCTTTGTTTACTTCCTGGACACGGGGTA
>XM_021598373.2
TTCAtctagaactctctctctctctcattgcttCTTGTGGTTATCCCATTTTTGGTCATTTTCTTCTAGATTCTAGAGGTTTAGTTGaatgctgataatgggccactgacatggatagagacagacagacactccatTCAGCCAGTGCAGAATGCTGTTGCCTCATCTGTTTTTGTAGTTGTATTTGCTAGAATGCTGTTTGCCTCATCCCTGTCTTTCTAGTCTTTTTGTACAAGTAacctgatcttagatctgggGCCAGGCTATTGTAGAACGCATGATAACAAGTAGTGGAATGATAATTCAAACAGACTGACTACCCAGGCTAATTGTAGAAGCATTTCACCCATAAATGACAACCCCGGTTGTAAAGTTTTTCAAATAAGGGAAATGTCACCACTAATATCTGACACAATCACGCTTAATGTGAGGAAGGTAAGGCGGCTGTTAGGAGTTTCAGAAGTGTCCCCTTTCCAGTTGGCACTGTATCAGTCACAATCATGGCTTGGTTTGTATTATCTGGGTGTATATGTTTGTCTTTGGTCTCCATAGGTGCTTATTAGTATCGCTGCTGACGCCATAGatagggtggctgttgtcattccGTAGTGTGTGGGTGGGGTGTCAAGGGAGGCAGTGAGACTAGGGTACTGGGTCAGGTAGCAGGCTAGAGGTAACAATTTACAGGTATGATTGCATGCCTGCTCTCTGGTGCATGCTAGCTTGCCTACCTGCTTCCCAGTGTAAGCTGACAGACCGGTGAACCAATTCCCAGATGGCCAGCTctgtgagaaatgtgtgtctgtcagtctgcctCATTTTAAACAGCATCGGTTTTGACCTAGTTGCTACTGTTGGTATAATACAGAATACAATACAACCTAAGCTATACTTTGATTCTTAAATCATCTTAACTgcattttgtttctctctgtttacACAGCAAAACCCAAGTCTTCCCAAATCAACTTTCCACCCTACTCCTCTTCTATACCCATTCCcacctctttccctccatccctctttccttccctcgcCCCACCTCTCCATCATCATGACCAGCGGAGCCCTGGGGCGTCTCAGTACCTTGACTCTGAGTGTGAAGCAGCTCAGCCGGCTGCCTCACCTCTCCGACGTCCTCCCCTcttcactcccctccctcccctcccccagccCCACCGTCCCTGTCTCCTGCGTCCCCACTCTGTTCCAGGAGCCTTACATCCTCTCTGGCTACCGCCCGGTTGGGCAAGACTGGCGCTGTTACGTCCTCAGCCTCTTCCAGAGACACAATGAATCCCTCAATGTCTGGACACACCTTCTGGCAGGTCCCCTGGTGCTACTACGCGTCTGGGCCTATGGATTGTCCCTAGACTCGGCgtccctgcctctctgcctgtacATACTGTCTGCCCTCACCTACTTGTGTTGTAGCGTAGCAGCTCACCTGCTTCAGTCCCACTCTGAGCTGGCCCACTATACTCTGTTCTTCCTGGACTAcgtgggtgtgtctgtgtatcaGTATGGCTGTTCGCTGGCTCACTATTTCTACTGCTCTGAGCCAGCCTGGAGGGAGAGCCCCGTAGgGTTCTGGTTCCTCCCTGGCGCTGCCTTACTTGGCTGGCTGTCCTGTGCTAGCTGCTGCTTTGCCAAGTCACGCTACCGCCGGCCTTACCCGCTCCGGAGGAAGATCTGCCAGCTGATCCCCACCAGCATGGCCTACTTCCTGGACATCAGCCCTGTAGCCCACCGCCTGGCTACCGTACCCTGGGGTCAGGACCCCGCTCTACCGCTCCACGCCCTGCAGATGGCCGCCTTCCTGCTTGCAGCCTTCTTCTTCTCCTGCCCTGTTCCTGAGAGGTTCTTCCCGGGGCATTGTGACATCATGGGTCAGGGTCACCAGATCTTCCacctcttcctgtctctgtgtaCGCTGTGTCAGCTGGAGGCCCTTTTCCTGGACTATGGCAGTCGGAGGGATACAGTGCTGCAGTTGTATGGGGAGAGGCAGCTGTGGTTCGCCGGTGTATCCTTCCTCGCCCTGGCACTATGTAGCACCCTGACTGCGGTTGTCATGAGGAGGCATGTACAGAGACGACTGGAGAAAAGTGAAACTGTGAAACAGTGAGGAATGGCAGggagaggaagaacgagagacaTGTTCAGTGTTTTGAGAATAATCATGTCCTGTAAATGTATAGAGAGACAGTATTTATCTAAGATGATGAGCATCTTTGTAGCAGATAAAGGTTTCTTGCCTTAAAAGATCATTTGATTCCTGTACAATCTAACCATGTCCTTCTTTGTTTACTTCCTGGACACGGGGTAAATATTTCTTCATTGCCTATTTCTGACTAGTTATTGGTCAATAAGCTTAGATTCAGacgcctggtcccagatctgtttgtgctgtatagtcAACGCCTATGGACATTGTCATGCCAAatgtacaaacagatctgggaccaggctattgaTTCAGTTTATATCTGAGGAATGAAGGGTGTTTTTGTGTTAAGCTTAATGGAAGTTCACCCTGAAGTCTGTCTGATTAAAGAGTCAGTGACATTTTTAAAGCTGGATTTTTTGGATTTCTCTTTCAGCTGTCGGAGTGAAACTGGGCAGGCCACGGGATTGAGCAAACAAAGAAGTCCGTTTTATTGAGCAGTGAACAGAACAGGCTGTGATTTGGGCCATAGTGACAGGCAGACTATAGGCCATTGCAGAGCAGGATATGACAACTAGAGCGATTGGGTTGAGGATCAGGAGGAGAGCTGTGGGTGACGAGGAGTCATGCTTTTATACATGCCGAACCTGGGTCATAGTGGATACACTAATTGGCATTTTTACAAAACTAGCCAAAAAAAAAGCATTGATGCAAGACACATCTACACAAAGAAATGTGTTGTGTGATTAAACCTAGACATTTGTATGACGTCCATATGAAAAAAGCCCATCAacatccatgtgtaactctgtgttgttgtctgttcacactgctttgctttatcttggccaggtcgcagttgtaaatgagaacttgttctcaactagcctacctggttaaataaaaggtgaaataaaattaaataaataaataaataggatgACTCGCTTGGGAATGGGAATTTTCCGAACATGAATGTAGAATTCTATAGCGAGCTTGTTGTTTGTATGGCCGGTAATTGAATACCAGTGTTCTGATTTTAGTTGACGTGATCCATGAAAACCATGACTGTACCAGGCAGGCAGAGAAAGCCGTTCAAACTCTTCCTCTAATTCTGCTATTGGTACACAGCACACTTGATCAGGTTTCTGTGCACACTATTGACTCTGGTTGCATCTGAAATGCTGCCCGATTCCTCACAGGGCTCTGCATGGTCAAGAGTTGTGCcttcaggaaagtattcagacccctttgactttttacacattttgttacattacagccttgttctaaaatgg

Function

symbol description
paqr8 Enables steroid binding activity. Acts upstream of or within response to steroid hormone and signal transduction. Located in plasma membrane. Is expressed in several structures, including brain; female organism; gill; gonad; and intestine. Orthologous to human PAQR8 (progestin and adipoQ receptor family member 8).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124651.1 False 1505 mRNA 0.55 9 40626393 40629684
XM_021598373.2 True 3465 mRNA 0.47 3 40626614 40630821

Neighbor

gene id symbol gene type direction distance location
stmn4 LOC106608277 coding upstream 29004 40579686 ~ 40597389 (+)
LOC110522596 LOC106591683 coding upstream 188585 40391650 ~ 40437808 (+)
LOC118936457 NA coding upstream 240090 40379534 ~ 40386303 (+)
LOC118964479 NA coding upstream 313712 40311638 ~ 40312681 (+)
syndig1l LOC106608262 coding upstream 360704 40182377 ~ 40268661 (+)
LOC110521109 LOC106608311 coding downstream 19833 40650654 ~ 40674839 (+)
LOC110522626 LOC106608310 coding downstream 77841 40708662 ~ 40714024 (+)
si:ch211-63o20.7 stk35 coding downstream 90705 40721526 ~ 40732661 (+)
LOC110521111 LOC106571044 coding downstream 147537 40778358 ~ 40868194 (+)
hmbox1b LOC106608307 coding downstream 237519 40868340 ~ 40887505 (+)
G351806 NA non-coding upstream 16672 40609242 ~ 40609721 (+)
G351804 NA non-coding upstream 18947 40607160 ~ 40607446 (+)
G351790 NA non-coding upstream 25230 40598575 ~ 40601163 (+)
G351789 NA non-coding upstream 28392 40597612 ~ 40598001 (+)
G351786 NA non-coding upstream 112284 40513718 ~ 40514109 (+)
G351819 NA non-coding downstream 1464 40632285 ~ 40634563 (+)
G351820 NA non-coding downstream 4915 40635736 ~ 40636000 (+)
G351831 NA non-coding downstream 30501 40661322 ~ 40664629 (+)
G351833 NA non-coding downstream 34271 40665092 ~ 40665512 (+)
G351836 NA non-coding downstream 37098 40667919 ~ 40668205 (+)
G351441 NA other upstream 489620 40134687 ~ 40136773 (+)
G350665 NA other upstream 1236919 39388141 ~ 39389474 (+)
G350211 NA other upstream 1721619 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 1728737 38890314 ~ 38897681 (+)
G349877 NA other upstream 2192369 38432179 ~ 38434024 (+)
G352136 LOC106608303 other downstream 359338 40990159 ~ 40990505 (+)
G352340 NA other downstream 579426 41210247 ~ 41210998 (+)
G352341 NA other downstream 580292 41211113 ~ 41214206 (+)
G352477 NA other downstream 735380 41366201 ~ 41366607 (+)
G353125 NA other downstream 1493855 42124676 ~ 42125759 (+)

Expression


Co-expression Network