LOC118964481


Basic Information

Item Value
gene id LOC118964481
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 40940631 ~ 40940967 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051539.1
taggggtagacaggtataatatatacaggtaggggtagaCAGGTATATTATAATAAACAGGTAGaggtagacaggtataatatacagGTAGGAGTAGActggtataatatacaggtaggagtAGAcatgtataatatacaggtaagtagacaggtagggtagacgggtataatatacaggtagggtagacgggtataatatacaggtagggtagacagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051539.1 True 219 mRNA 0.39 2 40940631 40940967

Neighbor

gene id symbol gene type direction distance location
hmbox1b LOC106608307 coding upstream 53126 40868340 ~ 40887505 (+)
LOC110521111 LOC106571044 coding upstream 72437 40778358 ~ 40868194 (+)
si:ch211-63o20.7 stk35 coding upstream 208280 40721526 ~ 40732661 (+)
LOC110522626 LOC106608310 coding upstream 226607 40708662 ~ 40714024 (+)
LOC110521109 LOC106608311 coding upstream 266054 40650654 ~ 40674839 (+)
LOC118964399 LOC106608301 coding downstream 97270 41038237 ~ 41041039 (+)
LOC110521114 LOC106608298 coding downstream 130515 41071482 ~ 41085688 (+)
LOC110522636 LOC106608297 coding downstream 485913 41426880 ~ 41445268 (+)
LOC110522641 LOC106608294 coding downstream 707825 41648792 ~ 41651426 (+)
LOC110522642 LOC106608292 coding downstream 723635 41664602 ~ 41675680 (+)
G352007 NA non-coding upstream 43191 40896128 ~ 40897440 (+)
G352002 NA non-coding upstream 62398 40877657 ~ 40878233 (+)
G351963 NA non-coding upstream 162418 40777364 ~ 40778213 (+)
G351960 elp3 non-coding upstream 176591 40758495 ~ 40764040 (+)
G352117 NA non-coding downstream 15926 40956893 ~ 40957205 (+)
G352130 NA non-coding downstream 34752 40975719 ~ 40976528 (+)
G352135 NA non-coding downstream 47460 40988427 ~ 40988642 (+)
G352158 NA non-coding downstream 53709 40994676 ~ 40994978 (+)
G352169 NA non-coding downstream 68588 41009555 ~ 41011855 (+)
G351441 NA other upstream 803858 40134687 ~ 40136773 (+)
G350665 NA other upstream 1551157 39388141 ~ 39389474 (+)
G350211 NA other upstream 2035857 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 2042975 38890314 ~ 38897681 (+)
G349877 NA other upstream 2506607 38432179 ~ 38434024 (+)
G352136 LOC106608303 other downstream 49192 40990159 ~ 40990505 (+)
G352340 NA other downstream 269280 41210247 ~ 41210998 (+)
G352341 NA other downstream 270146 41211113 ~ 41214206 (+)
G352477 NA other downstream 425234 41366201 ~ 41366607 (+)
G353125 NA other downstream 1183709 42124676 ~ 42125759 (+)

Expression


Co-expression Network