LOC118964399 (LOC106608301)


Basic Information

Item Value
gene id LOC118964399
gene name LOC106608301
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 41038237 ~ 41041039 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051447.1
TGGTGAACGAGGCATTTGTGGAGCTGCTGGAGGCAGTGCGTCAGGACCATTCAGGTCTGAAGGTTCAGTACCAGGGGGTTACGGGCTCTATCACCAGGACCAAAAAACCCTCCATCGCACTCAACATCATACAGGACTTCCTTACAGAGCGAAAGGAGGGCCTGGTAGAACTGTTCCAGAGTTTGGATAAAGAGGGAACCATGTCTGTGACCAACAAGGAGTTCAGGAAGGCTGTGCAGGTCTGACGCCACGAGCAGCCCACTGACAGAGTGACTAGTCACTGTTTCACAGTCTCCCAAGTGATTGAACATGAcaagatcaatcaatcaaccaatcaacaagatcaatcaaccaaccaatcagtcaatcaatcaacaaaTCAATTAATGTATATAATTTTGAATATGATGGTATAGATAACAATTTTGTTTGTGTATTGCAGCAAGCTAACATACCCCTGGATCAACAACAGCTGGAGTGGCTGATCCAGAACTTTGACAAGGACTGTACAGGCAGGATAAATTACAGGTGGGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTGCAGGTGGGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGCAGGGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGCCAGGCAGGATAAACTGCAGGTGGGTCAGGCAGGGTAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGGGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGCAGGGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGATGTGTCAGGCAGGGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGGGTCAGGCAGGATAAACTACAGGTGGGTCAGGCaggataaaatgcagttgtgtcaGTCAGGATAAACTACAGGTGTGTCAGGCAGGATAAACTACAGGTGGGTCAGGCAGGGTaaaatacaggtgtgtcaggcAGGATAAACT

Function

NR:

description
PREDICTED: leucine-rich repeat-containing protein 74A-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051447.1 True 1511 mRNA 0.48 3 41038237 41041039

Neighbor

gene id symbol gene type direction distance location
abcd4 abcd4 coding upstream 93233 40918240 ~ 40945004 (+)
LOC118964481 NA coding upstream 97270 40940631 ~ 40940967 (+)
hmbox1b LOC106608307 coding upstream 150732 40868340 ~ 40887505 (+)
LOC110521111 LOC106571044 coding upstream 170043 40778358 ~ 40868194 (+)
si:ch211-63o20.7 stk35 coding upstream 305886 40721526 ~ 40732661 (+)
LOC110521114 LOC106608298 coding downstream 30443 41071482 ~ 41085688 (+)
LOC110522636 LOC106608297 coding downstream 385841 41426880 ~ 41445268 (+)
LOC110522641 LOC106608294 coding downstream 607753 41648792 ~ 41651426 (+)
LOC110522642 LOC106608292 coding downstream 623563 41664602 ~ 41675680 (+)
LOC110522643 LOC106608291 coding downstream 635222 41676261 ~ 41681946 (+)
G352179 NA non-coding upstream 15188 41022787 ~ 41023049 (+)
G352173 NA non-coding upstream 25720 41012205 ~ 41012517 (+)
G352169 NA non-coding upstream 26382 41009555 ~ 41011855 (+)
G352158 NA non-coding upstream 43259 40994676 ~ 40994978 (+)
G352135 NA non-coding upstream 49595 40988427 ~ 40988642 (+)
G352194 NA non-coding downstream 14241 41055280 ~ 41060335 (+)
G352195 NA non-coding downstream 23178 41064217 ~ 41064737 (+)
G352213 NA non-coding downstream 50016 41091055 ~ 41097706 (+)
G352231 NA non-coding downstream 83965 41125004 ~ 41126843 (+)
G352136 LOC106608303 other upstream 47732 40990159 ~ 40990505 (+)
G351441 NA other upstream 901464 40134687 ~ 40136773 (+)
G350665 NA other upstream 1648763 39388141 ~ 39389474 (+)
G350211 NA other upstream 2133463 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 2140581 38890314 ~ 38897681 (+)
G352340 NA other downstream 169208 41210247 ~ 41210998 (+)
G352341 NA other downstream 170074 41211113 ~ 41214206 (+)
G352477 NA other downstream 325162 41366201 ~ 41366607 (+)
G353125 NA other downstream 1083637 42124676 ~ 42125759 (+)
LOC118964483 NA other downstream 1278661 42319401 ~ 42328637 (+)

Expression


Co-expression Network