Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964509 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 43287182 ~ 43287259 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051570.1 | True | 78 | mRNA | 0.44 | 1 | 43287182 | 43287259 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sh3bgrl2 | LOC106608335 | coding | upstream | 8867 | 43253892 ~ 43279017 (+) |
| si:dkey-71h2.2 | LOC104922452 | coding | upstream | 656666 | 42521786 ~ 42630516 (+) |
| si:ch211-278j3.3 | LOC106608328 | coding | upstream | 772721 | 42460358 ~ 42514461 (+) |
| LOC110522651 | LOC106608319 | coding | upstream | 854053 | 42370820 ~ 42433129 (+) |
| eif2b4 | LOC106608321 | coding | upstream | 922828 | 42329742 ~ 42364354 (+) |
| tbpl1 | tbpl1 | coding | downstream | 416760 | 43704019 ~ 43722541 (+) |
| slc2a12 | slc2a12 | coding | downstream | 453004 | 43740263 ~ 43768983 (+) |
| myb | myb | coding | downstream | 797357 | 44084616 ~ 44110268 (+) |
| ppp1r14c | ppp1r14c | coding | downstream | 1022214 | 44309473 ~ 44336978 (+) |
| nbas | LOC104962557 | coding | downstream | 1114057 | 44401316 ~ 44700404 (+) |
| G353963 | NA | non-coding | upstream | 3334 | 43282041 ~ 43283848 (+) |
| G353940 | NA | non-coding | upstream | 6516 | 43279806 ~ 43280666 (+) |
| G353952 | NA | non-coding | upstream | 40279 | 43246663 ~ 43246903 (+) |
| G353950 | NA | non-coding | upstream | 54628 | 43232135 ~ 43232554 (+) |
| G353944 | NA | non-coding | upstream | 81101 | 43205564 ~ 43206081 (+) |
| G353968 | NA | non-coding | downstream | 7241 | 43294500 ~ 43294783 (+) |
| G353969 | NA | non-coding | downstream | 7751 | 43295010 ~ 43295264 (+) |
| G353970 | NA | non-coding | downstream | 12036 | 43299295 ~ 43300099 (+) |
| G353978 | NA | non-coding | downstream | 24714 | 43311973 ~ 43312920 (+) |
| G353979 | NA | non-coding | downstream | 25959 | 43313218 ~ 43318002 (+) |
| G353820 | NA | other | upstream | 375005 | 42910886 ~ 42912213 (+) |
| G353339 | NA | other | upstream | 835773 | 42451032 ~ 42451409 (+) |
| G353328 | LOC106608329 | other | upstream | 843801 | 42442755 ~ 42443381 (+) |
| LOC118964483 | NA | other | upstream | 958545 | 42319401 ~ 42328637 (+) |
| G354462 | NA | other | downstream | 323703 | 43610962 ~ 43611562 (+) |
| G354630 | NA | other | downstream | 702864 | 43990123 ~ 43990639 (+) |
| G354819 | NA | other | downstream | 1172434 | 44459693 ~ 44461991 (+) |
| G355413 | NA | other | downstream | 1687777 | 44975036 ~ 44975829 (+) |
