XLOC_022489


Basic Information

Item Value
gene id XLOC_022489
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 32347999 ~ 32352704 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045039
GCGTCCTGTGCattttaggcatgggccggtgaaAGATTccgacagtatgataaccttggataaaaatatcagtttcccagtattgtaattactgctctaaaatattctttttcaatgtctgggtaaaaaaccaaaacttttttccccttcgaacatttattttattttgagaaacacaaAGTATTTTGGAAACAAGTCAGGCTCAATAACtctaatcattgacttctgctgtttttgttggtttaaaaaacacagatttctttacaatttaaaatggcaataACACAATTTccatatcttttctgctggagatactgtcctcctaaaaaacttaataaaaattttataaaacaattaaaaataaataaaaaaatcacaagtaGATTCACAAGTCTTTACCCATTTGTCTGCTAGAAGCTTCAGATACAACATTGTTTAACTtttgatatattaaaataaatcatttgtcaTTTTGACGTGTTATTTGCTGTCTATGCTTATAAAATCAAACAGAGTGCAAACAATGCAAGGAAAATATAGAGGTTTTTATTTACTGTGCAAAGTTCTTTAAAAcagtttctctgtgtttttacattttaatacctGGAGGtaattgtgattttatttaacaatataaaattctAAAAAGGCTATGAAGTTATAGGCCTAGTCTACAAACAAACAAGGGAAGGGCATTATATATTAATAGTACAAATGTAAACAGTGACGACGTTATCATTTAACAACCGTCTTCAACAtcataaataaactaatgtttatgttgagaaacatttatatGATAAATGAAAGACAAACTGAAAACACAGCATTCACCttataggctagttttttttctttataaacaCGTTAGGAAGTGGATGTTCAAAAATAATGACTACCTATAAATCTTTGTTGCAGTTACAATAGCAAATCCATCATCCGGGgaactttcttcagaatatccaCATCTACACAGTAGTTGATATAATGGATGAGGTACTCGAAAATGCTTGTGTCTTTGATTTAGATGATCTTCATCATGTTGTTAGTTTTCTCCCAGACTGTTTTCTCCCAGACTGACAGCGATGTGATCCTCGAAGAGCGCGATGCACAGCATGATGGCGCCCCCTGTCAGCAGGCCGAGAGCCTGCAGGAGGAAGCGCTTCAGCGGACTCACTGATCCACAGGCTCCGTGCAGCATCTCCGGCATCTGCTCAAATTAAGATGATTACCATGTCAGCAAGAGCTACATAGAGGAAGACACCGGCGGTGAGTGTGAGGATCCAGGGTGAGTGTGAAGCCCAGTGGTTCCCCAGCGCAGATCCGGCCAAAACACCCACAAAACCCAGCAGAGCAGAGAGCCCGCTGAACACCAGCAGCCTGCGCACAGGCCAGCCCGCAGACAACAACACCGCCAAATCACCTGCAAAATAAACAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045039 True 1438 lncRNA 0.37 2 32347999 32352704

Neighbor

gene id symbol gene type direction distance location
XLOC_022488 rnf41 coding downstream 13791 32308814 ~ 32334208 (-)
XLOC_022487 dgkaa coding downstream 43245 32238337 ~ 32304754 (-)
XLOC_022486 grasp coding downstream 111877 32199588 ~ 32236122 (-)
XLOC_022485 nr4a1 coding downstream 153602 32149269 ~ 32194397 (-)
XLOC_022484 CU469363.1 coding downstream 208041 32139843 ~ 32139958 (-)
XLOC_022490 ankrd52a coding upstream 9381 32362085 ~ 32390742 (-)
XLOC_022491 si:ch211-66i15.4 coding upstream 48102 32400806 ~ 32404029 (-)
XLOC_022492 NA coding upstream 56074 32408778 ~ 32570699 (-)
XLOC_022493 NA coding upstream 106151 32458855 ~ 32461920 (-)
XLOC_022494 NA coding upstream 137462 32490166 ~ 32496144 (-)
XLOC_022482 NA non-coding downstream 206679 32111318 ~ 32141320 (-)
XLOC_022480 NA non-coding downstream 340203 32006905 ~ 32007796 (-)
XLOC_022474 BX927365.2 non-coding downstream 593131 31754752 ~ 31754868 (-)
XLOC_022472 BX927365.1 non-coding downstream 630289 31693368 ~ 31717710 (-)
XLOC_022495 NA non-coding upstream 143607 32496311 ~ 32536550 (-)
XLOC_022497 BX470150.1 non-coding upstream 522842 32875546 ~ 32875660 (-)

Expression


Co-expression Network