XLOC_022490 (ankrd52a)


Basic Information

Item Value
gene id XLOC_022490
gene name ankrd52a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 32362085 ~ 32390742 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044360
GCCTCACCAGCTAAAGATTCACTCATCACGTCCATAATCGCAACACAAGATTGTCGTCTTGGTTTCCCAGCCTCGATTCCTTACTGATGAGGGACTTTCGGCCCGACTGACGCAGGGAGATGGGGGTACTCAATATTTCAGACCAGCCGCCTCTGGTCCAGGCCATATTTAACCGAAATGCAGATGAAGTGAAGTTATTTTTGCACAAGAAAGATGAAGTCAATGCACTGGACCAAGAGCGCCGCACACCTCTTCATGCTGCTGCCTGGCTGGGGGATGTTCATATAATGGATCTTCTCATCAGTGCAGGTGCGAATGTCAATGCAAAGGACCACGTGTGGCTAACACCATTGCACAGAGCAGCTGCTTCCAGAAACGAGAGGGCCGTGGGGCTGCTGCTGAGGAAGGGAGCTGACGTAACGGCACGGGATAAGTACTGGCAGACACCACTGCACATTGCAGCAGCTAACCGAGCCACGCGTTGCGTCGAGACCTTGCTGCCCCATGTGAGCAGCCTGAATATGGCCGACCGCACGGGCAGAGCACCACTGCATCATGCTGCTCAGAGTGGATACCAGGAGATGGTTAAATTGCTGCTGAACAAGGGAGCCAATCTGAGTGCCAGTGACAAGAAGGACAGGCAGCCCATTCATTGGGCAGCTTACCTTGGACATCTGGAGGTGGTTAAGCTGCTGGTGTCTCAGGGCTCGGATAAGAGCTGTAAGGATAAGCGAGGATACACCCCTCTCCACGCTGCTGCTGCCAGTGGCCACGTCGATGTGGTCAAATACCTGTTACGCAATGGAGCCGAGATTGATGAGCCTAATGCCTTTGGAAACACTGCTCTCCATGTGGCCTGTTACACGGGACAGGAGGCCGTAGCCAACGAGCTGGTCAACCGTGGGGCCAATGTCAACCAGCCCAACCACCGTGGCTACACCCCCCTGCACCTCGCTGCCGTGTCCACCAACGGGGCTCTCTGCCTGGAGCTGCTGGTCAACAACGGTGCTGATGTCAACATGCAGAGTAAAGAAGGGAAAAGCCCTTTGCACATGGCAGCCATTCATGGACGTTTCACTCGCTCTCAGATCCTCATTCAGAATgGTGGGGAGATAGACTGTGTGGACAGATATGGCAATACTCCTCTTCATGTTGCTGCTAAGTACGGCCATGAGCTGCTTATTAGCACCTTAATGACAAATGGTGCTGATACAGCcagACAAGGGATTCATGGGATGTTCCCTCTACACTTAGCTGTGCTTTACGGGTCCTCTGACTGTTGTCGTAAGCTACTTTCCTCAGgTCAGCTCTACAGCATTGTGTTGTCAATGAGTAAGGAACACGTGCTCTCGGCCGGATTTGACATCAATACCCCAGACAACTTTGGGAGGACCTGTCTACACGCTGCTGCCTCTGGAGGAAATATTGAATGTCTCAACCTGCTCTTAAGCAGTGGAGCTGACATGAATAAGAAGGACAAGTTTGGAAGGACTCCTTTGCACTATGCGGCTGCTAACGGCAGGTATCAGTGTGTGGTGGTTCTGGTTGGAGCAGGGGCGGAGGTCAATGAGCGGGATCGTTCCGGCTGTACACCTTTACACTACTCTGCTGCATCAACTGCATTCTGCAGAACGGACCGACCCCATGCCAGCACTCATCAGAACCAAGAGGACGGGGAGAAGGAATCATTTCTGTGTGTGGAGCACTTGTTGGACAATGGTGCTGATCCATGTTTGTGCAACACTAAAGGGTACAGTGCTGTGCATTACGCTGCAGCCCACGGAAACAAGCAAAACCTGGAGCTGCTTTTGGAGATGTGCTTCAACACACTAGGAGACAAAGAGAGCAATGGGTCCATCAGCCCACTACACTTGGCGGTGGAGTCGGGTCACTGGGAGTGTGTGACAGTGTTAATAGAGTCTGGagcgtgtgtggatgtgtgtgaccCGGTGGGCCGATCTGTGCTGTATTTGGCTTCCCAAAGAGGACACAGCCGCTGTGTTGAGCTCCTGCTCAGCCAATCAGCTTCCTGCCTCCTCGCAGAGCACCGCAGCAAATGGGGCCCTCTTCATGTTGCAGCTGCCAACGGCCACTCTGAATGTCTGCGGATGCTGCTGTGTAGTGAAGGGGGAGCCGACCTGGTTAATGTTACAGATGCGGAGGGGCAAACTCCACTAATGCTGGCAGTGCTGGGGGGACACACTGACTGTGTGCATCTGCTGCTGGAGAGAGGAGCTTGTCCTGACATGAAAGACAGGAGAGGAAGAACAGCCTTACACAGAGGGGCGGTGATGGGTCGAGAGGACTGTTTAACCGCCCTGCTGTCCCACAACGTCTCAGTCCTTAGCAGAGATTTCCAGGGGCGAAGCGCGCTCCATCTGGCTGCCTCTTGCGGTCATGCCGACATCCTCTCCAACCTTCTTTCTGCTGCTGATCACTCCCAACCCCAAGACCCACTCACTGACCGCCATGGCTACACACCCGCTCACTGGGCAGCCTATCACGGTCATGAAGACTGTTTGGAAGTTTTACTTGAACTTAAACCATGTAGTATCCAGGAGGGAAACCCCTTCACCCCACTGCACTGTGCTCTCATTAATGGCCATAGTGGTTCTGCAGAGCTGCTGTTGGAATCCAGTGTTTGTAATTCGCTGGTAAACATCAGGGATGCCAAAGGAAGGACCCCACTACACGCGGCCGCAGTTGCGGAAGACGTGGCTGGGCTGCAGCTGGTTCTGCGGCAAGGAGCAGACATCGATGCCGTGGACCACTCAGGCCGTTCTGCACTGATGGTGGCTGCCGACTATGGCCAAAGTGGTGCCGTGGCCCTGCTGCTGCACAGAGCCAAAGCTGATCTGTCCCTCCTGGATGTGAATAAGAACACTGCCCTGCACCTGGCCTGCAGCAAGGCTCATGAAATGTGTGCCATGCTGATCTTGAAGGAGATCCACAACCCTATCCTCATTAATGCAACCAACAGTATGCTTCAGATgCCCCTTCACATTGCAGCCAGGAATGGTTTGGCCACTGTGGTTCAGGCTTTGCTGAATCGTGGTGCCACCGTGCTGGCAGTGGATGAAGAAGGTCATACGCCAGCCCTGGCCTGTGCATCCAATAAAGCTGTTGCTGACTGCCTAGCTCTCATTCTGTCAACCATGAAGCCTTCCTCCTCCACAGCCTCCTCATCCTCGCCCTCTTCGCCCAGCCTCAACCTGCTCAAGCACTGTGGCATCACCGCCGCCTGCCCCCCTCTGCCCAATGGAGGCCTTCGCCATGGTTACGGCAAAGATCGCCATGGTGCTACCATCGGCTTGGATGGCTGCTTGACCGAGTGAGGCGTCCTTACTCGCTAAAAAAAAA

Function

symbol description
ankrd52a Orthologous to human ANKRD52 (ankyrin repeat domain 52).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050522-247 Orthologous to human ANKRD52 (ankyrin repeat domain 52).

Ensembl:

ensembl_id ENSDARG00000036826

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044360 True 3360 mRNA 0.54 28 32362085 32390742

Neighbor

gene id symbol gene type direction distance location
XLOC_022489 NA coding downstream 9381 32347999 ~ 32352704 (-)
XLOC_022488 rnf41 coding downstream 27877 32308814 ~ 32334208 (-)
XLOC_022487 dgkaa coding downstream 57331 32238337 ~ 32304754 (-)
XLOC_022486 grasp coding downstream 125963 32199588 ~ 32236122 (-)
XLOC_022485 nr4a1 coding downstream 167688 32149269 ~ 32194397 (-)
XLOC_022491 si:ch211-66i15.4 coding upstream 10064 32400806 ~ 32404029 (-)
XLOC_022492 NA coding upstream 18036 32408778 ~ 32570699 (-)
XLOC_022493 NA coding upstream 68113 32458855 ~ 32461920 (-)
XLOC_022494 NA coding upstream 99424 32490166 ~ 32496144 (-)
XLOC_022495 NA coding upstream 105569 32496311 ~ 32536550 (-)
XLOC_022482 NA non-coding downstream 220765 32111318 ~ 32141320 (-)
XLOC_022484 CU469363.1 non-coding downstream 222127 32139843 ~ 32139958 (-)
XLOC_022480 NA non-coding downstream 354289 32006905 ~ 32007796 (-)
XLOC_022474 BX927365.2 non-coding downstream 607217 31754752 ~ 31754868 (-)
XLOC_022497 BX470150.1 non-coding upstream 484804 32875546 ~ 32875660 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_13490506_13510044 ANKRD52, ANKRD52A coding CI01000001 null 13490484 ~ 13510044 (-)
bowfin (Amia calva) AMCG00008698 LOC105017093,LOC106583345,LOC106565408 coding CM030126.1 CM030126.1 9150060 ~ 9170282 (-)