XLOC_022493



Basic Information


Item Value
gene id XLOC_022493
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 32458855 ~ 32461920 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00045042
GAAAACTGGAGTTCGAGCCAATATCATCCGTCGTTTGATGTCGCGAAAAGATTGAAAAACTCGACTACAACTGCGTTCAGtggatCCTTCATGAAGAGTTACTGCAGCACTTTCAAGATTCATCCATTCGAACCAAACATGCTGAACAAGGTTAGCCGTATCACAGTTTCCCTCCACCAAATTTAAATAGGAGTTTGCATCCGCCATATATTATAGCCTCATATAACATGCCTTGCTGCTTTAATGGCAGAGCTTCATGTCATTCCTCATCTTTGCTAAGGTTTTATATGAGCAGGCACTTTGGCAGCTGTATTTAGAAGTGCGTCATTCA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00045042 True 331 lncRNA 0.42 3 32458855 32461920

Neighbor


gene id symbol gene type direction distance location
XLOC_022491 si:ch211-66i15.4 coding downstream 54826 32400806 ~ 32404029 (-)
XLOC_022490 ankrd52a coding downstream 68113 32362085 ~ 32390742 (-)
XLOC_022489 NA coding downstream 106151 32347999 ~ 32352704 (-)
XLOC_022488 rnf41 coding downstream 124647 32308814 ~ 32334208 (-)
XLOC_022487 dgkaa coding downstream 154101 32238337 ~ 32304754 (-)
XLOC_022494 NA coding upstream 28246 32490166 ~ 32496144 (-)
XLOC_022495 NA coding upstream 34391 32496311 ~ 32536550 (-)
XLOC_022496 plxna2 coding upstream 117575 32579495 ~ 33038423 (-)
XLOC_022497 BX470150.1 coding upstream 413626 32875546 ~ 32875660 (-)
XLOC_022498 AL929087.1 coding upstream 757085 33219005 ~ 33219128 (-)
XLOC_022482 NA non-coding downstream 317535 32111318 ~ 32141320 (-)
XLOC_022484 CU469363.1 non-coding downstream 318897 32139843 ~ 32139958 (-)
XLOC_022480 NA non-coding downstream 451059 32006905 ~ 32007796 (-)
XLOC_022474 BX927365.2 non-coding downstream 703987 31754752 ~ 31754868 (-)
XLOC_022499 NA non-coding upstream 771058 33232978 ~ 33336854 (-)

Expression



Co-expression Network