XLOC_022494


Basic Information

Item Value
gene id XLOC_022494
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 32490166 ~ 32496144 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045043
ataattattttttcacctttatttggataggaaagtagagagagttaacaggaaagcatggggagcagagagagaggaaggatCAGCttaggaatcgaactcgggtcgccgtgagcaccggagtgcatgtgtcgacgcaccaaccactacaccactggcgcagACGGATGTAGTAtttgtgacgtcacccataggtttccgAAGAGAATGCAGATGAAGATGAATGAAGCTACAAAGTCTCTGGGGTTTTGAGTAGGGATTGCCTCATAGCGAGTGTGTTCGGCCACGCCTGTGAGAACACAGAAGAGGACATGTTCCTTTAGTCGCAGGACAAGCGGACGTCACTGTGGACTGGACATAGTTCAGGTATCAGGAGGCACAGGGGGGTGGTGCCGGTCAGGGGTACTTGACCCTCTGTGaccttgtttatttttcagcCCAAACTGGGGGGGATGGTTTACACAAACTGCCACAGTGTTACTAGCATTCCATCGGGAAGGAGGATGACTTCCATATGGAAGGCTTAAGAGATATGCTCATGGATATTAATGATAAATAGGTCCATTTGCTTGTGTGGAAGCCATGGCgcattttttaataattctttgGTGAATGGAAAGttcaaaatgacatattttataaCATTATGAATGCTGTGATGTCTGATCAATGTGAAGAAAACACAACCTTTTAAGcatttatagttatttttaatCAAGATTAAGCACAATATTTTTGTATAGTTTGATCCACATTCATCATGACATTAAGCATACaccatttatcttttttttttttagaatcatCTGTTGATTCCAGTAAAGCACACCATTAAAATGTATGATGAGGAAAATAGTCAGATCTGACACAAAATTCCGATTAATTAGCTAAATAcagcaaataaaagtaaaaataaatattttatgaagACAACAAACTTTACTAGAATACACTGATCTTTTCGAATGTGTTTATGCTTGAATACATGGTTTGTCACAGACATTTATTGTTTGTCTCTTGTACATTGCTGCAATTGTCTTTGACTGGCATGCATCAAAACTTTATTCATGACATTGCGAGCTAGTTTGTCAGATCCAACTAAGAAACTTGTACCTGCACTATTGGACTTAAAAAGGAGGGGCTCAGCTGCAAACAGGGAAAGAAAATTGGGTTAAAAGGTTAGAATAGAATTTTTGCCAACCAGGGTTGTAATTTGTTTGTACACACATTGTAGATCAGTGTGATCGATATCCAAATTTAGGATGTAAACTATAATGATTTAAtagttatttaatacattttgattttaaataaacttaagcacATTAATAGTGAAAGCCGGTAATGACTTAAAGGTACAGTGTGTAATTCACCAGATGACGCATATTCATGGCAAACAAAGGCGTAGTTTGACGCCATGACCGAGTGTGGAATTGTGTGAGTTTTTAtcttcattacattttttaattgtgCTGGTTGTAATCACGTGaggaaaaagcactgcattacaattatataaacatttatgcTGTTCAGTGCAGATGATAAACACAAGACATTTTAAAGCATCTTTGGTATTTTCCAAGGCTGTGACGTCatcacgccccattcacatggggtgTCAGCATCAATGTTTCCCATTCACTTTAATGGTTGAAGTCAGGTGTTGCCGAACCGCATTGTTGATttgtcggcgccgcttcagtggcgttgctcgctggaGAAGTTCTGattttctcaacttttcaagcgctgacagaagcgtcagccaatcagatctctgtatgcaaatacaccagctcagacagtagccgattgctgactaatttcattggctgatgctgctatgactatcgcatcagccccaacttcagacacgccttctgtcaagcattgacgctgaagccccgtgtgaatcagGCTTTAACATAACAACTGTAACTGTTAACTAGTGGCCTGTTAATATgacattggctgtttatttgtatttaataagtACATATTTTGTATGATCTTAATTTACATTTCTAATCTTTCCTAACACCTAAGCCATTAACAATGCACATAACCATTATTAAGCAGCAAATCAGGAGTTTATTTAGGGAAATGTCATAGTTAATAGCAGAAACTggaccttaaaataaagtgtgaccaaaacattttcatttatagGCAGCACCAGATAGGACTTTATAAGAAAATATTAGTATTTCACACAACTACTGTGGTTCACACAAATGCATTTTGTAAGCAATGatgctataaaatatttaaatcagatTCAGTAAAATGGACCAATTgaaaaagtttacattttcttTCAAATGCCAGCTGTGAATCATTGTCAATAAATTGATATTATATTAGTATGTGCATATGATACATCGCTCAGCCCAAATTCCTCAGTTCTGCCAAATGCCAAACTATGAAGTGAAGTCATGCAGCATCTGCGCTCTGGACATGTTTCTATCTCTCTGTGGATGTTTATCACCACTAACCAAAGAGAGCTTTGAGCTTCCCCTGACTCCATTAAGGAAGTGAGAAGGGGCTGAGAAACTGTGTCTGTGGTTTGTTTGTTCAGTGACGCTTCTGTTAAGCTCTTATTCATCTGTCTGGTGTTGATAATTCTCAATGACAGTCTGTTAGGATTAAGGATGTTAAGGATGAGCAATCCTGTGCATCACATAGAACCAAACCACACATGAGTTCAAGCTagttcctttgtttatgtttgttt

Function

GO:

id name namespace
GO:0034204 lipid translocation biological_process
GO:0015914 phospholipid transport biological_process
GO:0015748 organophosphate ester transport biological_process
GO:0045332 phospholipid translocation biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045043 True 2737 lncRNA 0.38 2 32490166 32496144

Neighbor

gene id symbol gene type direction distance location
XLOC_022493 NA coding downstream 28246 32458855 ~ 32461920 (-)
XLOC_022491 si:ch211-66i15.4 coding downstream 86137 32400806 ~ 32404029 (-)
XLOC_022490 ankrd52a coding downstream 99424 32362085 ~ 32390742 (-)
XLOC_022489 NA coding downstream 137462 32347999 ~ 32352704 (-)
XLOC_022488 rnf41 coding downstream 155958 32308814 ~ 32334208 (-)
XLOC_022495 NA coding upstream 167 32496311 ~ 32536550 (-)
XLOC_022496 plxna2 coding upstream 83351 32579495 ~ 33038423 (-)
XLOC_022497 BX470150.1 coding upstream 379402 32875546 ~ 32875660 (-)
XLOC_022498 AL929087.1 coding upstream 722861 33219005 ~ 33219128 (-)
XLOC_022499 NA coding upstream 736834 33232978 ~ 33336854 (-)
XLOC_022482 NA non-coding downstream 348846 32111318 ~ 32141320 (-)
XLOC_022484 CU469363.1 non-coding downstream 350208 32139843 ~ 32139958 (-)
XLOC_022480 NA non-coding downstream 482370 32006905 ~ 32007796 (-)
XLOC_022500 AL929087.2 non-coding upstream 805160 33301304 ~ 33301419 (-)

Expression


Co-expression Network