Gene
RNA
| Item | Value |
|---|---|
| gene id | G312781 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 5185319 ~ 5185574 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106511844, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU354828 | True | 256 | lncRNA | 0.37 | 1 | 5185319 | 5185574 |
5,183,600
5,184,000
5,184,400
5,184,800
5,185,200
5,185,600
5,186,000
5,186,400
5,186,800
5,187,200
5,187,600
5,188,000
NC_048568.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521984 | LOC106607649 | coding | downstream | 64449 | 5113893 ~ 5120870 (-) |
| LOC110521982 | LOC106607651 | coding | downstream | 160329 | 5009876 ~ 5024990 (-) |
| LOC110521981 | LOC106607650 | coding | downstream | 176062 | 4933975 ~ 5009257 (-) |
| LOC110521979 | LOC106607652 | coding | downstream | 339650 | 4810320 ~ 4845669 (-) |
| LOC110521974 | LOC106600520 | coding | downstream | 791492 | 4370102 ~ 4393827 (-) |
| LOC110521031 | LOC106607646 | coding | upstream | 17751 | 5203325 ~ 5336821 (-) |
| LOC110521989 | LOC106607642 | coding | upstream | 373361 | 5558935 ~ 5580102 (-) |
| LOC118964391 | NA | coding | upstream | 400674 | 5586248 ~ 5587296 (-) |
| LOC110521991 | LOC106607640 | coding | upstream | 588365 | 5773939 ~ 5778108 (-) |
| LOC110521996 | LOC106607551 | coding | upstream | 1007702 | 6193276 ~ 6200262 (-) |
| G312776 | NA | non-coding | downstream | 4884 | 5180135 ~ 5180435 (-) |
| G312768 | NA | non-coding | downstream | 8661 | 5174765 ~ 5176658 (-) |
| G312535 | NA | non-coding | downstream | 22728 | 5162377 ~ 5162591 (-) |
| G312532 | NA | non-coding | downstream | 24589 | 5160490 ~ 5160730 (-) |
| G312528 | NA | non-coding | downstream | 26840 | 5158190 ~ 5158479 (-) |
| G312784 | NA | non-coding | upstream | 2307 | 5187881 ~ 5188229 (-) |
| G312832 | NA | non-coding | upstream | 117450 | 5303024 ~ 5303297 (-) |
| G312864 | NA | non-coding | upstream | 181073 | 5366647 ~ 5367058 (-) |
| G312869 | NA | non-coding | upstream | 192293 | 5377867 ~ 5378643 (-) |
| G312881 | NA | non-coding | upstream | 222500 | 5408074 ~ 5408506 (-) |
| G311859 | NA | other | downstream | 962008 | 4190120 ~ 4223311 (-) |
| LOC118964401 | LOC106591690 | other | downstream | 987358 | 4193595 ~ 4197990 (-) |
| G311694 | NA | other | downstream | 1255263 | 3929720 ~ 3930056 (-) |
| G308195 | NA | other | downstream | 3502280 | 1680178 ~ 1683039 (-) |
| G314127 | NA | other | upstream | 1298752 | 6484326 ~ 6491453 (-) |
| LOC110522000 | LOC106607553 | other | upstream | 1411998 | 6590264 ~ 6599823 (-) |
| LOC110521035 | LOC106607558 | other | upstream | 1712573 | 6871876 ~ 6970539 (-) |
| G314912 | LOC106607559 | other | upstream | 2003957 | 7189531 ~ 7189910 (-) |
| G315249 | LOC106607562 | other | upstream | 2234265 | 7419839 ~ 7431757 (-) |
