G316325


Basic Information

Item Value
gene id G316325
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 8461371 ~ 8461904 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU358638
gcatagatttcatgactagaagctcaaaagacgaaaatgtcattttttttttgtaaattgaaatttgctatcgtaaatgttagcaacacctctgcctttgcgggatgcacgggggatatggtcactagtgtagccaggaggtgaggcctcatttaacacagtaaattcatcaggcttaagccatgtttcagtcaagccaatcacatcaagattatgatcagtgattagttcattgactataattgcctttgaagtaagggatctaacattaagtagccctattttgagatgtgaggtatcacgatctctttcaataatgacaggaatggaggaggtctttatcctagtgagattgctaaggcgaacaccgccatgtttagttttgcccaacctaggtcgaggcacagacacggtctcaatggggatagctgagctgactacactgactgtgctagtggcagactccactaaaatggcaggctggctaacagcctgctgcctggcctgcaccctatttcattgtggagctagagg

Function

NR:

description
ORF2 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU358638 True 534 lncRNA 0.44 1 8461371 8461904

Neighbor

gene id symbol gene type direction distance location
LOC110522025 ints7 coding downstream 141680 8309484 ~ 8319691 (-)
LOC110522024 LOC106607581 coding downstream 152957 8223245 ~ 8308414 (-)
LOC110522023 LOC106607573 coding downstream 245616 8207113 ~ 8215755 (-)
LOC110522022 LOC106607574 coding downstream 270550 8183856 ~ 8190821 (-)
LOC110522021 LOC106607576 coding downstream 339055 8112317 ~ 8122316 (-)
LOC110522030 LOC106607586 coding upstream 129500 8591404 ~ 8615635 (-)
LOC110522031 LOC100380852 coding upstream 154433 8616337 ~ 8684888 (-)
LOC110522036 LOC106607590 coding upstream 642429 9104333 ~ 9133947 (-)
LOC110522038 LOC106607592 coding upstream 738743 9200647 ~ 9206289 (-)
LOC118964406 LOC106607592 coding upstream 780805 9242654 ~ 9279556 (-)
G316317 NA non-coding downstream 3198 8457686 ~ 8458173 (-)
G316316 NA non-coding downstream 4318 8456812 ~ 8457053 (-)
G316280 NA non-coding downstream 55054 8404817 ~ 8406317 (-)
G316281 NA non-coding downstream 56056 8403965 ~ 8405315 (-)
G316157 NA non-coding downstream 238280 8222765 ~ 8223091 (-)
G316594 NA non-coding upstream 74852 8536756 ~ 8537283 (-)
G316586 NA non-coding upstream 110745 8572649 ~ 8591276 (-)
G316656 NA non-coding upstream 204824 8666728 ~ 8672786 (-)
G316736 NA non-coding upstream 340691 8802595 ~ 8803327 (-)
G316738 NA non-coding upstream 341536 8803440 ~ 8803823 (-)
G315805 LOC106597702 other downstream 629310 7816293 ~ 7832061 (-)
LOC110522016 LOC106598538 other downstream 648244 7807918 ~ 7818393 (-)
G315249 LOC106607562 other downstream 1029614 7419839 ~ 7431757 (-)
G314912 LOC106607559 other downstream 1271461 7189531 ~ 7189910 (-)
LOC110521035 LOC106607558 other downstream 1527762 6871876 ~ 6970539 (-)
G316845 NA other upstream 390266 8852170 ~ 8853030 (-)
LOC118964435 LOC106607592 other upstream 819016 9280920 ~ 9282086 (-)
LOC110513790 LOC106607592 other upstream 854082 9309373 ~ 9318116 (-)

Expression


Co-expression Network