G319758


Basic Information

Item Value
gene id G319758
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 11453739 ~ 11454034 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU362392
TAAAAAGACATGCTTTGGTTAAACATCTATTAGCAGAACACTGCCCAGGCCCCTAGAGATTCTCCTATTGGTCAGAACGACTCCAAGCTCAGGGGAGGGAGGGTTTCTGTTCGAAACGATTTCTCCCACAGCTGTTCGGTGTTACATCATTAGTCATCTGCTCCATAGAAAGTGTTGCCGTCCAAAGGCGCTCTATGGAGGCTGTATTTGGGGATCTTCAGTTCACATTAGCAGAGGAAAGGTGGCAGAAAATAATATATAACTACTGTGAAATGGCTGTTTTCCTATCAATTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU362392 True 296 lncRNA 0.44 1 11453739 11454034

Neighbor

gene id symbol gene type direction distance location
nkx2.1c nkx2.1c coding upstream 59911 11391075 ~ 11393828 (+)
LOC110522079 LOC106607678 coding upstream 75153 11376071 ~ 11378586 (+)
LOC110522077 LOC106607676 coding upstream 195221 11256307 ~ 11258518 (+)
cebpz cebpz coding upstream 211073 11233728 ~ 11242666 (+)
LOC110522075 LOC106607674 coding upstream 233836 11166761 ~ 11219903 (+)
LOC110522084 LOC106607683 coding downstream 133008 11587042 ~ 11593022 (+)
cd109 cd109 coding downstream 140733 11594767 ~ 11617568 (+)
LOC110522091 senp6 coding downstream 500546 11954580 ~ 11974428 (+)
myo6a myo6 coding downstream 525187 11979221 ~ 12075119 (+)
mei4 mei4 coding downstream 764400 12218434 ~ 12264532 (+)
G319751 NA non-coding upstream 7759 11445627 ~ 11445980 (+)
G319460 LOC100380636 non-coding upstream 30223 11421803 ~ 11423516 (+)
G319459 NA non-coding upstream 51763 11394100 ~ 11401976 (+)
G319408 NA non-coding upstream 110496 11293204 ~ 11343243 (+)
G319760 NA non-coding downstream 2765 11456799 ~ 11457061 (+)
G319794 LOC106607684 non-coding downstream 139080 11593114 ~ 11593699 (+)
G319962 NA non-coding downstream 329945 11783979 ~ 11784386 (+)
G320017 NA non-coding downstream 403092 11857126 ~ 11857945 (+)
G320051 NA non-coding downstream 437830 11891864 ~ 11892886 (+)
LOC118964431 LOC106571213 other upstream 1990242 9447091 ~ 9472617 (+)
G317265 NA other upstream 2033410 9419418 ~ 9420329 (+)
LOC110521039 NA other upstream 2223222 9212373 ~ 9241817 (+)
G316996 NA other upstream 2414570 9038700 ~ 9039169 (+)
LOC110522117 smim8 other downstream 1094436 12548411 ~ 12549119 (+)
LOC110522108 pm20d2 other downstream 1346802 12800778 ~ 12812377 (+)
LOC110521046 LOC106607715 other downstream 1526366 12928115 ~ 12981592 (+)
G321447 NA other downstream 1688913 13142947 ~ 13143443 (+)
G322645 NA other downstream 2396253 13850287 ~ 13885503 (+)

Expression


Co-expression Network