G320154



Basic Information


Item Value
gene id G320154
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 12093027 ~ 12094349 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU362814
GATCTATATACACTTTAAGCAATTAACTAAATCAACTAAAAACAAAGCAATCCCCTGGTAGGTTTAAGAATTGGAGAGTCAAGATACAAGATCAATTGAAAAGTAGTGTACTTGAAATGCAGAGCATGGAAATCAACCACTTTTTTCTTGCAGATTTGAATGACACTATCAAAAATTTAGCAATATTCAGCTCTGTCAATGCGGAAGCTGGAGGGTAAACATATTAGTTcaatgggattaatagcaatgaTACATCAATGTTGATACATCaatttctttcctttttgttTTTGTGAACAGTGAAGATGCCAAGGTCGAATGAGTTGTGTAATCCTTTATCAGATTAGTGAAGCGGGCTCGAGCCACTAACTGGCATGGATATTATTGCATGTGACAGCACTGGCCACCACAGGGCCCGCAAATTAGGGAGGGAGCAACTCTGCAATTATTCTATTCACACAGGGCTTTGTATTGTACTACTTACATGCCTTCCATCCTAAGATGAAAAAGCCTATGAAAACCTTGTTAACCCAAAAGGGATACTTTGTGATTTTGGCAACGAGGCCCtctatctacttccccagagtcagatgaactcgtggatataATTTAATGCagtacctctaacttccttcatactggacacagagacataaaaatggtacccacgagttcatctgattctggggaagtagatagaGGGCCTTGTTGCCAAAATCACAAAGTATAAATGAGCTACAGAAGGGGAGAAAAATGAGTCCCAGTTTCAGCTGACTTTGGTCGCCATTTCTCAACAATGTCCCTGGTTGATGTATTGACCCATCATGGCTGCAGTGCACAAACAGCCGAGtaatagagctcgccagcttgtagtcctaaaaaccAGAAATGAtttacctctggttcgttcagccattcctaaTGGGCAGAAAGAATAGAGTTTTGGAATAAATGccaaaaataaggtctgaggttaacacaggcttctgagatcttatatgttttgttctaCGAGATaacatcagtcagttaacatgacctttatgaattatgaagccttagTCTATTACTTTAAAAAAGTTCACAAAttcttcaaaattcacaaaaactGATGTAAGCTGATGAAGATTATagcatagaacaaaacgtatataTGATCTCCTAAACTtatgtttaccacagaccttatttt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU362814 True 1192 lncRNA 0.38 2 12093027 12094349

Neighbor


gene id symbol gene type direction distance location
myo6a myo6 coding upstream 17908 11979221 ~ 12075119 (+)
LOC110522091 senp6 coding upstream 118599 11954580 ~ 11974428 (+)
cd109 cd109 coding upstream 475459 11594767 ~ 11617568 (+)
LOC110522084 LOC106607683 coding upstream 500005 11587042 ~ 11593022 (+)
nkx2.1c nkx2.1c coding upstream 699199 11391075 ~ 11393828 (+)
mei4 mei4 coding downstream 124085 12218434 ~ 12264532 (+)
LOC110522099 LOC106607699 coding downstream 254288 12348637 ~ 12368506 (+)
LOC110522100 LOC106607702 coding downstream 327991 12422340 ~ 12433780 (+)
LOC110520967 LOC106607907 coding downstream 414993 12509342 ~ 12510838 (+)
LOC110522116 LOC106607703 coding downstream 425870 12520219 ~ 12535736 (+)
G320052 NA non-coding upstream 177150 11913044 ~ 11915877 (+)
G320051 NA non-coding upstream 200141 11891864 ~ 11892886 (+)
G320017 NA non-coding upstream 235082 11857126 ~ 11857945 (+)
G319962 NA non-coding upstream 308641 11783979 ~ 11784386 (+)
G319794 LOC106607684 non-coding upstream 499328 11593114 ~ 11593699 (+)
G320169 NA non-coding downstream 19711 12114060 ~ 12114266 (+)
G320710 NA non-coding downstream 172577 12266926 ~ 12267266 (+)
G320751 NA non-coding downstream 177045 12271394 ~ 12271622 (+)
G320762 NA non-coding downstream 184945 12279294 ~ 12279689 (+)
G320816 NA non-coding downstream 224363 12318712 ~ 12319104 (+)
LOC110522079 LOC106607678 other upstream 715271 11376071 ~ 11378586 (+)
LOC118964431 LOC106571213 other upstream 2629530 9447091 ~ 9472617 (+)
G317265 NA other upstream 2672698 9419418 ~ 9420329 (+)
LOC110521039 NA other upstream 2862510 9212373 ~ 9241817 (+)
G316996 NA other upstream 3053858 9038700 ~ 9039169 (+)
LOC110522117 smim8 other downstream 454121 12548411 ~ 12549119 (+)
LOC110522108 pm20d2 other downstream 706487 12800778 ~ 12812377 (+)
LOC110521046 LOC106607715 other downstream 886051 12928115 ~ 12981592 (+)
G321447 NA other downstream 1048598 13142947 ~ 13143443 (+)
G322645 NA other downstream 1755938 13850287 ~ 13885503 (+)

Expression



Co-expression Network