G320169


Basic Information

Item Value
gene id G320169
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 12114060 ~ 12114266 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU362829
ctgtatctcccCAAGCAGATACCTCGTCGGCCCTGGAAGCACTTCACTGGACtccatgtaaactggaaaccatacatcctgacgctgcatttattgtagccggggattttaacaaagctaacctgAGAACGAGtcttcctaaattctatcagcatatcgaatgcgcaacACGGGCTGctagcattctggatcattgctactctaact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU362829 True 207 lncRNA 0.47 1 12114060 12114266

Neighbor

gene id symbol gene type direction distance location
myo6a myo6 coding upstream 38941 11979221 ~ 12075119 (+)
LOC110522091 senp6 coding upstream 139632 11954580 ~ 11974428 (+)
cd109 cd109 coding upstream 496492 11594767 ~ 11617568 (+)
LOC110522084 LOC106607683 coding upstream 521038 11587042 ~ 11593022 (+)
nkx2.1c nkx2.1c coding upstream 720232 11391075 ~ 11393828 (+)
mei4 mei4 coding downstream 104168 12218434 ~ 12264532 (+)
LOC110522099 LOC106607699 coding downstream 234371 12348637 ~ 12368506 (+)
LOC110522100 LOC106607702 coding downstream 308074 12422340 ~ 12433780 (+)
LOC110520967 LOC106607907 coding downstream 395076 12509342 ~ 12510838 (+)
LOC110522116 LOC106607703 coding downstream 405953 12520219 ~ 12535736 (+)
G320154 NA non-coding upstream 19711 12093027 ~ 12094349 (+)
G320052 NA non-coding upstream 198183 11913044 ~ 11915877 (+)
G320051 NA non-coding upstream 221174 11891864 ~ 11892886 (+)
G320017 NA non-coding upstream 256115 11857126 ~ 11857945 (+)
G319962 NA non-coding upstream 329674 11783979 ~ 11784386 (+)
G320710 NA non-coding downstream 152660 12266926 ~ 12267266 (+)
G320751 NA non-coding downstream 157128 12271394 ~ 12271622 (+)
G320762 NA non-coding downstream 165028 12279294 ~ 12279689 (+)
G320816 NA non-coding downstream 204446 12318712 ~ 12319104 (+)
G320850 NA non-coding downstream 245151 12359417 ~ 12360035 (+)
LOC110522079 LOC106607678 other upstream 736304 11376071 ~ 11378586 (+)
LOC118964431 LOC106571213 other upstream 2650563 9447091 ~ 9472617 (+)
G317265 NA other upstream 2693731 9419418 ~ 9420329 (+)
LOC110521039 NA other upstream 2883543 9212373 ~ 9241817 (+)
G316996 NA other upstream 3074891 9038700 ~ 9039169 (+)
LOC110522117 smim8 other downstream 434204 12548411 ~ 12549119 (+)
LOC110522108 pm20d2 other downstream 686570 12800778 ~ 12812377 (+)
LOC110521046 LOC106607715 other downstream 866134 12928115 ~ 12981592 (+)
G321447 NA other downstream 1028681 13142947 ~ 13143443 (+)
G322645 NA other downstream 1736021 13850287 ~ 13885503 (+)

Expression


Co-expression Network