G320816


Basic Information

Item Value
gene id G320816
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 12318712 ~ 12319104 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU363545
cagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggcctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtttttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccacc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU363545 True 393 lncRNA 0.44 1 12318712 12319104

Neighbor

gene id symbol gene type direction distance location
mei4 mei4 coding upstream 54180 12218434 ~ 12264532 (+)
myo6a myo6 coding upstream 243593 11979221 ~ 12075119 (+)
LOC110522091 senp6 coding upstream 344284 11954580 ~ 11974428 (+)
cd109 cd109 coding upstream 701144 11594767 ~ 11617568 (+)
LOC110522084 LOC106607683 coding upstream 725690 11587042 ~ 11593022 (+)
LOC110522099 LOC106607699 coding downstream 29533 12348637 ~ 12368506 (+)
LOC110522100 LOC106607702 coding downstream 103236 12422340 ~ 12433780 (+)
LOC110520967 LOC106607907 coding downstream 190238 12509342 ~ 12510838 (+)
LOC110522116 LOC106607703 coding downstream 201115 12520219 ~ 12535736 (+)
LOC110522117 smim8 coding downstream 229307 12548411 ~ 12549119 (+)
G320762 NA non-coding upstream 39023 12279294 ~ 12279689 (+)
G320751 NA non-coding upstream 47090 12271394 ~ 12271622 (+)
G320710 NA non-coding upstream 51446 12266926 ~ 12267266 (+)
G320169 NA non-coding upstream 204446 12114060 ~ 12114266 (+)
G320154 NA non-coding upstream 224363 12093027 ~ 12094349 (+)
G320850 NA non-coding downstream 40313 12359417 ~ 12360035 (+)
G320836 LOC106607698 non-coding downstream 55338 12374442 ~ 12378884 (+)
G320852 NA non-coding downstream 62199 12381303 ~ 12383243 (+)
G320865 LOC106607700 non-coding downstream 85012 12404116 ~ 12405247 (+)
G320933 LOC106607906 non-coding downstream 121478 12440582 ~ 12440802 (+)
LOC110522079 LOC106607678 other upstream 940956 11376071 ~ 11378586 (+)
LOC118964431 LOC106571213 other upstream 2855215 9447091 ~ 9472617 (+)
G317265 NA other upstream 2898383 9419418 ~ 9420329 (+)
LOC110521039 NA other upstream 3088195 9212373 ~ 9241817 (+)
G316996 NA other upstream 3279543 9038700 ~ 9039169 (+)
LOC110522108 pm20d2 other downstream 481732 12800778 ~ 12812377 (+)
LOC110521046 LOC106607715 other downstream 661296 12928115 ~ 12981592 (+)
G321447 NA other downstream 823843 13142947 ~ 13143443 (+)
G322645 NA other downstream 1531183 13850287 ~ 13885503 (+)

Expression


Co-expression Network