G321051


Basic Information

Item Value
gene id G321051
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 12531393 ~ 12531632 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU363828
attttaactaggtaaattgtgttacttctcttgcaacagagtcagggtatatgcagcagtttgggccgcctggctcattgcgaactgtgtgaagactatttcttcctaacaaagacagccaacatcgccaaacgggggatgatttaacaaaagcgcatttgcgaaaaaagcacaatcgttgcacaactgtacctaaccataaacaccaatgcctttattaaaatcaacacacagaagtat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU363828 True 240 lncRNA 0.41 1 12531393 12531632

Neighbor

gene id symbol gene type direction distance location
LOC110520967 LOC106607907 coding upstream 20726 12509342 ~ 12510838 (+)
LOC110522100 LOC106607702 coding upstream 97613 12422340 ~ 12433780 (+)
LOC110522099 LOC106607699 coding upstream 162887 12348637 ~ 12368506 (+)
mei4 mei4 coding upstream 266861 12218434 ~ 12264532 (+)
myo6a myo6 coding upstream 456274 11979221 ~ 12075119 (+)
LOC110522117 smim8 coding downstream 16779 12548411 ~ 12549119 (+)
LOC110522118 LOC106607706 coding downstream 29238 12560870 ~ 12564649 (+)
LOC110522111 LOC106607707 coding downstream 42684 12574316 ~ 12581049 (+)
pnrc1 pnrc1 coding downstream 263272 12794904 ~ 12798111 (+)
LOC110522108 pm20d2 coding downstream 269146 12800778 ~ 12812377 (+)
G321045 NA non-coding upstream 7957 12523216 ~ 12523436 (+)
G321039 NA non-coding upstream 13568 12517600 ~ 12517825 (+)
G321036 NA non-coding upstream 15767 12514967 ~ 12515626 (+)
G320995 NA non-coding upstream 44058 12487129 ~ 12487335 (+)
G321054 NA non-coding downstream 20700 12552332 ~ 12552539 (+)
G321055 NA non-coding downstream 20969 12552601 ~ 12552836 (+)
G321201 NA non-coding downstream 242627 12774259 ~ 12775354 (+)
G321227 NA non-coding downstream 281969 12813601 ~ 12819677 (+)
G321228 NA non-coding downstream 282619 12814251 ~ 12818852 (+)
LOC110522079 LOC106607678 other upstream 1153637 11376071 ~ 11378586 (+)
LOC118964431 LOC106571213 other upstream 3067896 9447091 ~ 9472617 (+)
G317265 NA other upstream 3111064 9419418 ~ 9420329 (+)
LOC110521039 NA other upstream 3300876 9212373 ~ 9241817 (+)
G316996 NA other upstream 3492224 9038700 ~ 9039169 (+)
LOC110521046 LOC106607715 other downstream 448768 12928115 ~ 12981592 (+)
G321447 NA other downstream 611315 13142947 ~ 13143443 (+)
G322645 NA other downstream 1318655 13850287 ~ 13885503 (+)

Expression


Co-expression Network