G321054


Basic Information

Item Value
gene id G321054
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 12552332 ~ 12552539 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU363831
aactgttacgatcagtaggCTTCCTGTgaagatcagtgtatagaacattatcttcacacaagatcagaagatcaagaaaactgaattgacgtgtatcagattgcataataaatctcagatgctcagagcaggagttaagaaaagcatggaacgcctggagctgttttgcatcacccctccaCAGAACAATaatatcatcaatataccg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU363831 True 208 lncRNA 0.39 1 12552332 12552539

Neighbor

gene id symbol gene type direction distance location
LOC110522117 smim8 coding upstream 3213 12548411 ~ 12549119 (+)
LOC110522116 LOC106607703 coding upstream 16596 12520219 ~ 12535736 (+)
LOC110520967 LOC106607907 coding upstream 41665 12509342 ~ 12510838 (+)
LOC110522100 LOC106607702 coding upstream 118552 12422340 ~ 12433780 (+)
LOC110522099 LOC106607699 coding upstream 183826 12348637 ~ 12368506 (+)
LOC110522118 LOC106607706 coding downstream 8331 12560870 ~ 12564649 (+)
LOC110522111 LOC106607707 coding downstream 21777 12574316 ~ 12581049 (+)
pnrc1 pnrc1 coding downstream 242365 12794904 ~ 12798111 (+)
LOC110522108 pm20d2 coding downstream 248239 12800778 ~ 12812377 (+)
LOC110521046 LOC106607715 coding downstream 375576 12928115 ~ 12981592 (+)
G321051 NA non-coding upstream 20700 12531393 ~ 12531632 (+)
G321045 NA non-coding upstream 28896 12523216 ~ 12523436 (+)
G321039 NA non-coding upstream 34507 12517600 ~ 12517825 (+)
G321036 NA non-coding upstream 36706 12514967 ~ 12515626 (+)
G321055 NA non-coding downstream 62 12552601 ~ 12552836 (+)
G321201 NA non-coding downstream 221720 12774259 ~ 12775354 (+)
G321227 NA non-coding downstream 261062 12813601 ~ 12819677 (+)
G321228 NA non-coding downstream 261712 12814251 ~ 12818852 (+)
G321254 NA non-coding downstream 297733 12850272 ~ 12853113 (+)
LOC110522079 LOC106607678 other upstream 1174576 11376071 ~ 11378586 (+)
LOC118964431 LOC106571213 other upstream 3088835 9447091 ~ 9472617 (+)
G317265 NA other upstream 3132003 9419418 ~ 9420329 (+)
LOC110521039 NA other upstream 3321815 9212373 ~ 9241817 (+)
G321447 NA other downstream 590408 13142947 ~ 13143443 (+)
G322645 NA other downstream 1297748 13850287 ~ 13885503 (+)
G325389 fabp7 other downstream 3882714 16435253 ~ 16436882 (+)

Expression


Co-expression Network