G321055


Basic Information

Item Value
gene id G321055
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 12552601 ~ 12552836 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU363832
tctccatgtaacccacatacaaattaGCATAGTTAGGAGCCATGGGGGATCCCATAGCAGTAACTTTCGTCTGAATAAAGAAATAATTTAGAAACATGAAATAGTTATGCATAAGTACTATTTCAGCCAATGTTACAATGCATGCACTGGAAGGTAGTTCATTAGGGTCAcgttgcagaagaaaatgttccatagctTCAATACCGCCCTCGTGTGGAATATTAGTGTATAATGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU363832 True 236 lncRNA 0.38 1 12552601 12552836

Neighbor

gene id symbol gene type direction distance location
LOC110522117 smim8 coding upstream 3482 12548411 ~ 12549119 (+)
LOC110522116 LOC106607703 coding upstream 16865 12520219 ~ 12535736 (+)
LOC110520967 LOC106607907 coding upstream 41934 12509342 ~ 12510838 (+)
LOC110522100 LOC106607702 coding upstream 118821 12422340 ~ 12433780 (+)
LOC110522099 LOC106607699 coding upstream 184095 12348637 ~ 12368506 (+)
LOC110522118 LOC106607706 coding downstream 8034 12560870 ~ 12564649 (+)
LOC110522111 LOC106607707 coding downstream 21480 12574316 ~ 12581049 (+)
pnrc1 pnrc1 coding downstream 242068 12794904 ~ 12798111 (+)
LOC110522108 pm20d2 coding downstream 247942 12800778 ~ 12812377 (+)
LOC110521046 LOC106607715 coding downstream 375279 12928115 ~ 12981592 (+)
G321054 NA non-coding upstream 62 12552332 ~ 12552539 (+)
G321051 NA non-coding upstream 20969 12531393 ~ 12531632 (+)
G321045 NA non-coding upstream 29165 12523216 ~ 12523436 (+)
G321039 NA non-coding upstream 34776 12517600 ~ 12517825 (+)
G321036 NA non-coding upstream 36975 12514967 ~ 12515626 (+)
G321201 NA non-coding downstream 221423 12774259 ~ 12775354 (+)
G321227 NA non-coding downstream 260765 12813601 ~ 12819677 (+)
G321228 NA non-coding downstream 261415 12814251 ~ 12818852 (+)
G321254 NA non-coding downstream 297436 12850272 ~ 12853113 (+)
G321256 LOC101472980 non-coding downstream 301084 12853920 ~ 12854586 (+)
LOC110522079 LOC106607678 other upstream 1174845 11376071 ~ 11378586 (+)
LOC118964431 LOC106571213 other upstream 3089104 9447091 ~ 9472617 (+)
G317265 NA other upstream 3132272 9419418 ~ 9420329 (+)
LOC110521039 NA other upstream 3322084 9212373 ~ 9241817 (+)
G321447 NA other downstream 590111 13142947 ~ 13143443 (+)
G322645 NA other downstream 1297451 13850287 ~ 13885503 (+)
G325389 fabp7 other downstream 3882417 16435253 ~ 16436882 (+)

Expression


Co-expression Network