G321256 (LOC101472980)


Basic Information

Item Value
gene id G321256
gene name LOC101472980
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 12853920 ~ 12854586 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU364045
CTGGCCGGTACGGCCCGGCGGTCGATCCAGAACGACACCCAGGACAACATGACCATCAGAGTCGCAGGGAAGTAGGTCTGGAGCAGGAAGAAGAAGATGTGGCGTCGCAAGGTGAAGTTGATGTACAGACGGTTGTACCAGCCTGTGCTGCTGTAGAAAGCCAGTCTGGAGGTAGTGTGAAACTTCTGGATGAGGaactgagacagagagattcTGTCATCCGTGCTCAGGGACTCATCCCCACTCTTCCAGTACAGCATGAGGTCCTCGTCCGTGTAAGCATCTGGAGACAACAGAAATGGATTTCTAATTGAAATCTGCCTAATGTACTGTACCGCCACACCAAATCCCTTCATAACACAGT

Function

NR:

description
PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU364045 True 364 lncRNA 0.52 2 12853920 12854586

Neighbor

gene id symbol gene type direction distance location
LOC110522108 pm20d2 coding upstream 41543 12800778 ~ 12812377 (+)
pnrc1 pnrc1 coding upstream 55809 12794904 ~ 12798111 (+)
LOC110522111 LOC106607707 coding upstream 272871 12574316 ~ 12581049 (+)
LOC110522118 LOC106607706 coding upstream 289271 12560870 ~ 12564649 (+)
LOC110522117 smim8 coding upstream 304801 12548411 ~ 12549119 (+)
LOC110521046 LOC106607715 coding downstream 73529 12928115 ~ 12981592 (+)
LOC110522103 casp8ap2 coding downstream 179558 13034144 ~ 13045663 (+)
LOC110522121 gja10 coding downstream 192761 13047347 ~ 13049135 (+)
LOC110520969 fut9 coding downstream 930128 13784714 ~ 13785790 (+)
LOC110522126 LOC106607723 coding downstream 937398 13791984 ~ 13801419 (+)
G321254 NA non-coding upstream 807 12850272 ~ 12853113 (+)
G321227 NA non-coding upstream 34243 12813601 ~ 12819677 (+)
G321228 NA non-coding upstream 35068 12814251 ~ 12818852 (+)
G321201 NA non-coding upstream 78566 12774259 ~ 12775354 (+)
G321055 NA non-coding upstream 301084 12552601 ~ 12552836 (+)
G321323 NA non-coding downstream 111364 12965950 ~ 12966209 (+)
G321328 NA non-coding downstream 114504 12969090 ~ 12969309 (+)
G321330 NA non-coding downstream 119089 12973675 ~ 12973877 (+)
G321219 lyrm2 non-coding downstream 127192 12981778 ~ 12982330 (+)
G321413 NA non-coding downstream 254369 13108955 ~ 13109508 (+)
LOC110522079 LOC106607678 other upstream 1476164 11376071 ~ 11378586 (+)
LOC118964431 LOC106571213 other upstream 3390423 9447091 ~ 9472617 (+)
G317265 NA other upstream 3433591 9419418 ~ 9420329 (+)
G321447 NA other downstream 288361 13142947 ~ 13143443 (+)
G322645 NA other downstream 995701 13850287 ~ 13885503 (+)
G325389 fabp7 other downstream 3580667 16435253 ~ 16436882 (+)
G327705 NA other downstream 5409704 18264290 ~ 18304442 (+)

Expression


Co-expression Network