G321844



Basic Information


Item Value
gene id G321844
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 12977321 ~ 12977528 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU364664
tcaagaagctgattaaacagcacgatcattacacattGTGCTAGGGAAAATAAAAGCCactaaaaatgtgcagttttgtcacacaacacaatgtcacagatgtctcaagttttgagggagcgtgcaattggcatgctgactgcagttatgtccaccagagctgttgccagagaggtccaggaccaagtttggggaAACCCTGTtctag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU364664 True 208 lncRNA 0.45 1 12977321 12977528

Neighbor


gene id symbol gene type direction distance location
ube2j1 ube2j1 coding downstream 54719 12893185 ~ 12922602 (-)
LOC110522109 gabrr2 coding downstream 85891 12850899 ~ 12891430 (-)
LOC110522110 LOC106607712 coding downstream 149554 12820195 ~ 12827767 (-)
rngtt rngtt coding downstream 185573 12646336 ~ 12791748 (-)
cnr1 LOC106607709 coding downstream 366386 12605893 ~ 12610935 (-)
lyrm2 lyrm2 coding upstream 3756 12981284 ~ 12982769 (-)
LOC110522101 mdn1 coding upstream 5398 12982926 ~ 13034097 (-)
LOC110522120 bach2 coding upstream 74577 13052105 ~ 13151000 (-)
LOC110522122 map3k7 coding upstream 198040 13173776 ~ 13197235 (-)
LOC110522125 epha7 coding upstream 595365 13572893 ~ 13647267 (-)
G321843 NA non-coding downstream 256 12976836 ~ 12977065 (-)
G321842 NA non-coding downstream 775 12976338 ~ 12976546 (-)
G321841 NA non-coding downstream 2036 12974867 ~ 12975285 (-)
G321840 NA non-coding downstream 2835 12974259 ~ 12974486 (-)
G321839 NA non-coding downstream 7472 12969520 ~ 12969849 (-)
G321845 NA non-coding upstream 276 12977804 ~ 12978116 (-)
G321826 LOC106607715 non-coding upstream 1745 12979273 ~ 12979559 (-)
G321825 LOC106607715 non-coding upstream 2320 12979848 ~ 12980308 (-)
G321917 NA non-coding upstream 149288 13126816 ~ 13127532 (-)
LOC110522115 LOC106571283 other downstream 429804 12545954 ~ 12547517 (-)
G320883 NA other downstream 658923 12318003 ~ 12318398 (-)
LOC110522088 LOC106607688 other downstream 1083748 11891326 ~ 11893699 (-)
arid1b arid1b other downstream 2064543 10885486 ~ 10996157 (-)
adam17b LOC106607660 other downstream 2321870 10622094 ~ 10655451 (-)
G323167 prs27 other upstream 1150961 14128489 ~ 14187171 (-)
G324432 NA other upstream 2276336 15253864 ~ 15255008 (-)
rnf217 rnf217 other upstream 3041900 16019428 ~ 16125180 (-)

Expression



Co-expression Network