G321423


Basic Information

Item Value
gene id G321423
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 13119288 ~ 13119615 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU364217
tgaccatcattttcacttgtctgaccgcttgcatgatgaggagtttctcacacgactggcctatctcttttttcttgcctgaatgatctgacTCTAGGATTACAGGAACTCTCCGCAACTATactcaatgtgcgggacaaaattaaGGCTATGATTAAgtagttggagctcttctctgtctgcattaacaaggagaacacacaggtctttccatcattgtatgatttttttgtgtgcaaatgaactcaagcttacggacaatgtcaaatgtgatatagcgaagcacctgagtgagttgggtgcgcaattacgcaggtactttcccgaa

Function

NR:

description
PREDICTED: zinc finger BED domain-containing protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU364217 True 328 lncRNA 0.43 1 13119288 13119615

Neighbor

gene id symbol gene type direction distance location
LOC110522121 gja10 coding upstream 70153 13047347 ~ 13049135 (+)
LOC110522103 casp8ap2 coding upstream 73625 13034144 ~ 13045663 (+)
LOC110521046 LOC106607715 coding upstream 137696 12928115 ~ 12981592 (+)
LOC110522108 pm20d2 coding upstream 306911 12800778 ~ 12812377 (+)
pnrc1 pnrc1 coding upstream 321177 12794904 ~ 12798111 (+)
LOC110520969 fut9 coding downstream 665099 13784714 ~ 13785790 (+)
LOC110522126 LOC106607723 coding downstream 672369 13791984 ~ 13801419 (+)
LOC110522131 LOC106607727 coding downstream 788704 13908319 ~ 13914582 (+)
LOC110522133 LOC106607729 coding downstream 814977 13934592 ~ 13954337 (+)
LOC110522134 LOC106607731 coding downstream 944729 14064344 ~ 14131367 (+)
G321422 NA non-coding upstream 141 13118728 ~ 13119147 (+)
G321413 NA non-coding upstream 9780 13108955 ~ 13109508 (+)
G321219 lyrm2 non-coding upstream 136958 12981778 ~ 12982330 (+)
G321330 NA non-coding upstream 145411 12973675 ~ 12973877 (+)
G321328 NA non-coding upstream 149979 12969090 ~ 12969309 (+)
G321424 NA non-coding downstream 45 13119660 ~ 13119874 (+)
G321425 NA non-coding downstream 584 13120199 ~ 13120439 (+)
G321426 NA non-coding downstream 1075 13120690 ~ 13120894 (+)
G321434 NA non-coding downstream 8214 13127829 ~ 13128223 (+)
G321449 NA non-coding downstream 24541 13144156 ~ 13144494 (+)
LOC110522117 smim8 other upstream 570174 12548411 ~ 12549119 (+)
LOC110522079 LOC106607678 other upstream 1741532 11376071 ~ 11378586 (+)
LOC118964431 LOC106571213 other upstream 3655791 9447091 ~ 9472617 (+)
G321447 NA other downstream 23332 13142947 ~ 13143443 (+)
G322645 NA other downstream 730672 13850287 ~ 13885503 (+)
G325389 fabp7 other downstream 3315638 16435253 ~ 16436882 (+)
G327705 NA other downstream 5144675 18264290 ~ 18304442 (+)
G327995 LOC106607813 other downstream 5307539 18427154 ~ 18428907 (+)

Expression


Co-expression Network