G321917


Basic Information

Item Value
gene id G321917
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 13126816 ~ 13127532 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU364754
taccatgattatggataatcaatcctaaatgaatcgtgaataatgatgagtgagaaagttatagACGCACAAaaatcatacccccccccccccccccccccaaaaaaatgctaaccttccctgttattgtaatggtgaaaggttagcatgtcttggggttattatattgtgtgtctgtaactttctcactcattattattcacgattcattcaggattattcctaatcatggtagcatccacattaatgtagaagtgtttagaaacatattatattcttatttacaataaaagtgactccaaaatgacacaatacattatttaccattcatttctattgggcataaaataatctgaaacacaaccaaagcaaacagcaaatgcatccaacaacttTGTAGAGTCataagcttgatgtagtcattacgTTCTATGAATGTGGGACCAAATACTTTACTTTTTACCACATTGATACACatacaagtgaatttgtcccaatacttttggtcccctaaaatggggggactatgtacaaaaagggcTCTAATTTCTACCCTCAAATTAGAATTTGCACTTTAACTTCAtagtcattgtttgatttcaaatcaAACTTTTGTAGTATGGAAGAaaaaatgcttcactgtcccaataattatggagggcactgtgattcatatcataggcctaatactactgtagagctctttttaattgcaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU364754 True 717 lncRNA 0.35 1 13126816 13127532

Neighbor

gene id symbol gene type direction distance location
LOC110522101 mdn1 coding downstream 92719 12982926 ~ 13034097 (-)
lyrm2 lyrm2 coding downstream 144047 12981284 ~ 12982769 (-)
ube2j1 ube2j1 coding downstream 204214 12893185 ~ 12922602 (-)
LOC110522109 gabrr2 coding downstream 235386 12850899 ~ 12891430 (-)
LOC110522110 LOC106607712 coding downstream 299049 12820195 ~ 12827767 (-)
LOC110522122 map3k7 coding upstream 48036 13173776 ~ 13197235 (-)
LOC110522125 epha7 coding upstream 445361 13572893 ~ 13647267 (-)
LOC110522127 LOC106607724 coding upstream 682216 13809748 ~ 13821911 (-)
LOC110522128 LOC106607726 coding upstream 698268 13825800 ~ 13827498 (-)
dse LOC106607725 coding upstream 701524 13829056 ~ 13858174 (-)
G321825 LOC106607715 non-coding downstream 146508 12979848 ~ 12980308 (-)
G321826 LOC106607715 non-coding downstream 147257 12979273 ~ 12979559 (-)
G321845 NA non-coding downstream 148700 12977804 ~ 12978116 (-)
G321844 NA non-coding downstream 149288 12977321 ~ 12977528 (-)
G321925 NA non-coding upstream 27184 13154716 ~ 13155198 (-)
G321929 NA non-coding upstream 32363 13159895 ~ 13160234 (-)
G321931 NA non-coding upstream 36405 13163937 ~ 13164194 (-)
G321937 NA non-coding upstream 43653 13171185 ~ 13171391 (-)
G321938 NA non-coding upstream 43882 13171414 ~ 13171639 (-)
LOC110522115 LOC106571283 other downstream 579299 12545954 ~ 12547517 (-)
G320883 NA other downstream 808418 12318003 ~ 12318398 (-)
LOC110522088 LOC106607688 other downstream 1233243 11891326 ~ 11893699 (-)
arid1b arid1b other downstream 2214038 10885486 ~ 10996157 (-)
G323167 prs27 other upstream 1000957 14128489 ~ 14187171 (-)
G324432 NA other upstream 2126332 15253864 ~ 15255008 (-)
rnf217 rnf217 other upstream 2891896 16019428 ~ 16125180 (-)
G325696 NA other upstream 3211800 16339332 ~ 16340707 (-)

Expression


Co-expression Network