G321434


Basic Information

Item Value
gene id G321434
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 13127829 ~ 13128223 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU364228
ATTTGTTTGGGATGATAATGTGTGCATTACACAAGCTGAAATTCACAGTGTGTAAATCCACCGAGAGAGGTCTAACGGGGAACCAAGGAAAGCCCAGCCACAAGCAAGAGAAAACCAACTGCAAACCCGGAGAGAAAAGTCTAGATCATAGATCAGTGCGGTCATAAGAGGGTGGGTGACACATGCACATAGGACTGACACATACAGCATATGGTTGGCTGCGACATGGAACTATAATTCCGCGTGAGAACATCCACCAGAGGCTTCTGACAGTCCATTCAGTATCCACTGCGTGCCACGCCAGGCATTTAAAAGGCACACAATGCAGACAGACGTTCAAGTGCACAAACACATACTGTCTTCAAAGAAAAATCTGATCTgaattacactactct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU364228 True 395 lncRNA 0.46 1 13127829 13128223

Neighbor

gene id symbol gene type direction distance location
LOC110522121 gja10 coding upstream 78694 13047347 ~ 13049135 (+)
LOC110522103 casp8ap2 coding upstream 82166 13034144 ~ 13045663 (+)
LOC110521046 LOC106607715 coding upstream 146237 12928115 ~ 12981592 (+)
LOC110522108 pm20d2 coding upstream 315452 12800778 ~ 12812377 (+)
pnrc1 pnrc1 coding upstream 329718 12794904 ~ 12798111 (+)
LOC110520969 fut9 coding downstream 656491 13784714 ~ 13785790 (+)
LOC110522126 LOC106607723 coding downstream 663761 13791984 ~ 13801419 (+)
LOC110522131 LOC106607727 coding downstream 780096 13908319 ~ 13914582 (+)
LOC110522133 LOC106607729 coding downstream 806369 13934592 ~ 13954337 (+)
LOC110522134 LOC106607731 coding downstream 936121 14064344 ~ 14131367 (+)
G321426 NA non-coding upstream 6935 13120690 ~ 13120894 (+)
G321425 NA non-coding upstream 7390 13120199 ~ 13120439 (+)
G321424 NA non-coding upstream 7955 13119660 ~ 13119874 (+)
G321423 NA non-coding upstream 8214 13119288 ~ 13119615 (+)
G321422 NA non-coding upstream 8682 13118728 ~ 13119147 (+)
G321449 NA non-coding downstream 15933 13144156 ~ 13144494 (+)
G321452 NA non-coding downstream 22510 13150733 ~ 13151077 (+)
G321453 NA non-coding downstream 23635 13151858 ~ 13152077 (+)
G321459 NA non-coding downstream 26790 13155013 ~ 13155312 (+)
G321467 NA non-coding downstream 42900 13171123 ~ 13171363 (+)
LOC110522117 smim8 other upstream 578715 12548411 ~ 12549119 (+)
LOC110522079 LOC106607678 other upstream 1750073 11376071 ~ 11378586 (+)
LOC118964431 LOC106571213 other upstream 3664332 9447091 ~ 9472617 (+)
G321447 NA other downstream 14724 13142947 ~ 13143443 (+)
G322645 NA other downstream 722064 13850287 ~ 13885503 (+)
G325389 fabp7 other downstream 3307030 16435253 ~ 16436882 (+)
G327705 NA other downstream 5136067 18264290 ~ 18304442 (+)
G327995 LOC106607813 other downstream 5298931 18427154 ~ 18428907 (+)

Expression


Co-expression Network