G321452


Basic Information

Item Value
gene id G321452
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 13150733 ~ 13151077 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU364246
TTTCGCTTGTTTTCTTGTAATCCAACCTTTTTGTccgtttaaaaaatattttttatcacATGGTGACTTCCTTGCAGTTTCCTAAAGCCCCCGACTGAAGGGAGAATACATTTACTTTACACTATTCgtttatttctttctttttttaaatgaagatTTGTGGTTATAAAAAGTGTTGTTCTTCTTCAGcaaatgtcagtgtgtgtgatgaTCCTGTGCAGCGTGCTGCTCCGTCTCCGCTGTTTATTACACTCGAATGGAACGCCTACTCTGAATGGCTACATTGTTGACATTGGGCCACTGACGTCATTCTATCCCTCATTCACAACATTACGCCGTGCAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU364246 True 345 lncRNA 0.39 1 13150733 13151077

Neighbor

gene id symbol gene type direction distance location
LOC110522121 gja10 coding upstream 101598 13047347 ~ 13049135 (+)
LOC110522103 casp8ap2 coding upstream 105070 13034144 ~ 13045663 (+)
LOC110521046 LOC106607715 coding upstream 169141 12928115 ~ 12981592 (+)
LOC110522108 pm20d2 coding upstream 338356 12800778 ~ 12812377 (+)
pnrc1 pnrc1 coding upstream 352622 12794904 ~ 12798111 (+)
LOC110520969 fut9 coding downstream 633637 13784714 ~ 13785790 (+)
LOC110522126 LOC106607723 coding downstream 640907 13791984 ~ 13801419 (+)
LOC110522131 LOC106607727 coding downstream 757242 13908319 ~ 13914582 (+)
LOC110522133 LOC106607729 coding downstream 783515 13934592 ~ 13954337 (+)
LOC110522134 LOC106607731 coding downstream 913267 14064344 ~ 14131367 (+)
G321449 NA non-coding upstream 6239 13144156 ~ 13144494 (+)
G321434 NA non-coding upstream 22510 13127829 ~ 13128223 (+)
G321426 NA non-coding upstream 29839 13120690 ~ 13120894 (+)
G321425 NA non-coding upstream 30294 13120199 ~ 13120439 (+)
G321424 NA non-coding upstream 30859 13119660 ~ 13119874 (+)
G321453 NA non-coding downstream 781 13151858 ~ 13152077 (+)
G321459 NA non-coding downstream 3936 13155013 ~ 13155312 (+)
G321467 NA non-coding downstream 20046 13171123 ~ 13171363 (+)
G321469 NA non-coding downstream 35969 13187046 ~ 13188239 (+)
G321496 NA non-coding downstream 84270 13235347 ~ 13235745 (+)
G321447 NA other upstream 7290 13142947 ~ 13143443 (+)
LOC110522117 smim8 other upstream 601619 12548411 ~ 12549119 (+)
LOC110522079 LOC106607678 other upstream 1772977 11376071 ~ 11378586 (+)
G322645 NA other downstream 699210 13850287 ~ 13885503 (+)
G325389 fabp7 other downstream 3284176 16435253 ~ 16436882 (+)
G327705 NA other downstream 5113213 18264290 ~ 18304442 (+)
G327995 LOC106607813 other downstream 5276077 18427154 ~ 18428907 (+)
G328474 NA other downstream 5605778 18756855 ~ 18757545 (+)

Expression


Co-expression Network