G321453


Basic Information

Item Value
gene id G321453
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 13151858 ~ 13152077 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU364247
GGACCAAGGTGTAGGCATGGAGGGAAGCTGGCGGTAGAACATGAGGCATGTTACTCAGGCACGTTTTGTTCTGGATCAGCCCACATACTGTTTGTACAAGAGAGCTTTGGCTGGAAATGTTTTCATTTATAATGTAAGATTCTTCCTCAGGGGAGTTTGCGTGTAATTATGCATGATCATGATGCTACAGACAGCTTTTAGTTTTCATCCCAATACATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU364247 True 220 lncRNA 0.43 1 13151858 13152077

Neighbor

gene id symbol gene type direction distance location
LOC110522121 gja10 coding upstream 102723 13047347 ~ 13049135 (+)
LOC110522103 casp8ap2 coding upstream 106195 13034144 ~ 13045663 (+)
LOC110521046 LOC106607715 coding upstream 170266 12928115 ~ 12981592 (+)
LOC110522108 pm20d2 coding upstream 339481 12800778 ~ 12812377 (+)
pnrc1 pnrc1 coding upstream 353747 12794904 ~ 12798111 (+)
LOC110520969 fut9 coding downstream 632637 13784714 ~ 13785790 (+)
LOC110522126 LOC106607723 coding downstream 639907 13791984 ~ 13801419 (+)
LOC110522131 LOC106607727 coding downstream 756242 13908319 ~ 13914582 (+)
LOC110522133 LOC106607729 coding downstream 782515 13934592 ~ 13954337 (+)
LOC110522134 LOC106607731 coding downstream 912267 14064344 ~ 14131367 (+)
G321452 NA non-coding upstream 781 13150733 ~ 13151077 (+)
G321449 NA non-coding upstream 7364 13144156 ~ 13144494 (+)
G321434 NA non-coding upstream 23635 13127829 ~ 13128223 (+)
G321426 NA non-coding upstream 30964 13120690 ~ 13120894 (+)
G321425 NA non-coding upstream 31419 13120199 ~ 13120439 (+)
G321459 NA non-coding downstream 2936 13155013 ~ 13155312 (+)
G321467 NA non-coding downstream 19046 13171123 ~ 13171363 (+)
G321469 NA non-coding downstream 34969 13187046 ~ 13188239 (+)
G321496 NA non-coding downstream 83270 13235347 ~ 13235745 (+)
G321497 NA non-coding downstream 83712 13235789 ~ 13236718 (+)
G321447 NA other upstream 8415 13142947 ~ 13143443 (+)
LOC110522117 smim8 other upstream 602744 12548411 ~ 12549119 (+)
LOC110522079 LOC106607678 other upstream 1774102 11376071 ~ 11378586 (+)
G322645 NA other downstream 698210 13850287 ~ 13885503 (+)
G325389 fabp7 other downstream 3283176 16435253 ~ 16436882 (+)
G327705 NA other downstream 5112213 18264290 ~ 18304442 (+)
G327995 LOC106607813 other downstream 5275077 18427154 ~ 18428907 (+)
G328474 NA other downstream 5604778 18756855 ~ 18757545 (+)

Expression


Co-expression Network