G322425


Basic Information

Item Value
gene id G322425
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 13562978 ~ 13565416 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU365293
atttttataataaccgaaagtgagaggttgtatcctgaataaagggaaaaaggtcATTCTTGAACACGGTGTGAGCCATTGTTACTAGTCTGCTAGAAaaccagttcggatttaagtataGTTATTTTACACCCGTTTAATTGTGTCTGGCCTGCCATTTCAGGTAAAGTGGAATAtttttttgctcatataatttttttaaaaacaagtcGTTAGGTGTAGCCAGGCCCATAAGTAAATAGGTAAATTGAGATACGACTAAaacatttttccacaaatagacggTGTTGTCCTTTCCATGGTACCAAGATCTTATTTAATTTggctaactttctattaaaatgtattgcagtgaaatattttttttcagaATTTAAATACAGTGTATGTCCACATCACTGTCAACATTTTTATTAGTAAACTACGAGGTAatgtaaaagtaaaacattttaaattgcGGATTTAAAAGAAAATATGAATCATCAGTGTATAATGACACCAGTTTTTAAGCCCTGGATGTCTagccccttgatattattgttggatctgattttaatagctaacatttcgatggccataataaatagatatgccaatAGCGGACAAACCtcttttactcctcttgacaataTAATACcttctgagaagtagccattattccCTATTTACACCTGGGGTGagtatacataactttaacccattttataagagattctccaaaatcaAAAAtagtccaggcatttatatataaattccaGTCGTACTTTTAAAGTCAGCTATGAGTACCAGGCGTGGCTTCCCAGATGTCATAGCGTTCTATTGTTTCCAATACTTGTCTTACATTATCTCCTATGTAtggtccatgtaaaaaaaaaaaactgtctgattGCAATGACTAATATCTCACAATACCTTTTGAATTCTATACGCTATGCATTTTGTTAGGATTTTGGCATCACAGCACTGAAGTGTAAGGTTTTTTTTTAGGTGGACTGGATCTttaccacctgggtcctgtttcagtaacaGGGGAATATCATCTTCTTTCTGAGTATAACAGtctaccatttctataggagcGGTTAAAACATGTTAACGGACCTTTGAGTACATTGAAACATATTTGATATACCTCAACTGGtgtgccatccagccctggagttttccctgacttaaaaaaaacaaaacatttttaattGTTTCATtgaaccgttatttaactaggcaagtcagttaaagaacaaattcttatttacaatgatggcctaccccggccgaaCCTTAACCCCggacgacgcagggccaattgtgtgaGGCTTTATGAAGGCTTTAATTGAATctagaagttcctcctctgtaattagGTCTTCACATGACTCTTTCTGTATAGCTGTTAATTTTACACTattattagaaaaaaaatccttacaattaacttcagttagtagagatggaggagactgaaatgaaagcgtatgcttaaagtactttgcttcctctttTTTAAATATTGTTTAGTGAATCATGGATGACTCTGTCATTTGTAACAAGATTctgtaaattatttttggtagcattACTATGTTGAACATACAAAAACGATTTGGTTCATTTCCCCCCATATTCCATCAAATTggctttattttttataatatgaTACAcatgatctttcttgaataagttcttccatttcttttttctatttctttttgtttttcctctaacttgtTTTATGCCTCTATGTTACAGCTTTTATTGCCctctatctgtactgttagttcctccatttcctttgttaatatgaaaCTATTATAACCTAAATAGTTTTTGTTTTAATGATGACTATTGAATTGCATAGCCTCTAatggcacatttaaaagtgtcccatacaaatattttttatttaattttttatttaacctttatttaactaggcaaatcagttaagaacaaataagtGGATATGCTGTACCCATGTTATGTAGGAGAAAATTCTGTTATAAATTCTTCTGTCTTGGTTAAAAACAAGTTGACTTCCAGTAGACTTTGATAAATATTTCCTATATCCTCGACCTTGCGGAAACTCTGTAAGAGTAACGTGTATACAAATTATTTGATGGTCCGaccacattctgtctcctatctTTTAACTTTTGGAGCCAGCGaaaatgacataagaaagtagtcaagacaaCCAGCTTGACTGAGCCTCTGCCATGTACTgtgtatctcactaggtcaggatatttaaacctccatatatccactagttccaATATCCATAATATTCTTAATATCCTTAAGTGCATGAGGGTGATAgattgtagtgtgatttcctttacggtccattgaggtacCTAAAACCGTATTATAATCTCACACCATAATAATTGACTCATGTATTGCCTGTAAACATAATAAATTAtgatatatattttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU365293 True 2439 lncRNA 0.33 1 13562978 13565416

Neighbor

gene id symbol gene type direction distance location
LOC110522122 map3k7 coding downstream 365743 13173776 ~ 13197235 (-)
LOC110522120 bach2 coding downstream 411978 13052105 ~ 13151000 (-)
LOC110522101 mdn1 coding downstream 528881 12982926 ~ 13034097 (-)
lyrm2 lyrm2 coding downstream 580209 12981284 ~ 12982769 (-)
ube2j1 ube2j1 coding downstream 640376 12893185 ~ 12922602 (-)
LOC110522125 epha7 coding upstream 7477 13572893 ~ 13647267 (-)
LOC110522127 LOC106607724 coding upstream 244332 13809748 ~ 13821911 (-)
LOC110522128 LOC106607726 coding upstream 260384 13825800 ~ 13827498 (-)
dse LOC106607725 coding upstream 263640 13829056 ~ 13858174 (-)
LOC110522132 LOC106607728 coding upstream 292768 13858184 ~ 13916995 (-)
G322291 NA non-coding downstream 43309 13519421 ~ 13519669 (-)
G322290 NA non-coding downstream 43612 13519127 ~ 13519366 (-)
G321944 NA non-coding downstream 367068 13195662 ~ 13195910 (-)
G321940 NA non-coding downstream 389651 13173025 ~ 13173327 (-)
G321938 NA non-coding downstream 391339 13171414 ~ 13171639 (-)
G322426 NA non-coding upstream 207 13565623 ~ 13567138 (-)
G322421 NA non-coding upstream 5060 13570476 ~ 13572093 (-)
G322423 NA non-coding upstream 6743 13572159 ~ 13572890 (-)
G322563 NA non-coding upstream 157472 13722888 ~ 13723132 (-)
LOC110522115 LOC106571283 other downstream 1015461 12545954 ~ 12547517 (-)
G320883 NA other downstream 1244580 12318003 ~ 12318398 (-)
LOC110522088 LOC106607688 other downstream 1669405 11891326 ~ 11893699 (-)
G323167 prs27 other upstream 563073 14128489 ~ 14187171 (-)
G324432 NA other upstream 1688448 15253864 ~ 15255008 (-)
rnf217 rnf217 other upstream 2454012 16019428 ~ 16125180 (-)
G325696 NA other upstream 2773916 16339332 ~ 16340707 (-)
G325960 LOC106607776 other upstream 3081339 16646755 ~ 16662881 (-)

Expression


Co-expression Network