G322733


Basic Information

Item Value
gene id G322733
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 13823826 ~ 13871569 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU365619
gactgaccaggtgaaagctatgatcccttattgttaaatccacttcaaccagtgtagatgaaagggaagagacaggttaaagaaggatttttaagccttgagacgtgtgtgtgtgtgccattcagaaggtgaatgggcaaaatacattatttaagtgactttgaacggctttcaggcgcactggtttgtgtatcaagaactgcaacgctgctgggtttttcacactcaacagttgcttgtgtgtatcaagaatggtccaccacccaaaggacatctacttgacacaactgtgggaaacattggagtccacatgtgccagcatccctgtggaacggttTTGACACATTGAAAAGTCCattgaggcttttctgagggcaaaagggggttcaactcaatattaggaagatgttcctaatgttttgtacactctgtactTTGCAGGGCCATTTATTTCATAAAAGAGTAGAATCATGATGCTGTTTACTTTCCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU365619 True 490 lncRNA 0.42 2 13823826 13871569

Neighbor

gene id symbol gene type direction distance location
LOC110522127 LOC106607724 coding downstream 1915 13809748 ~ 13821911 (-)
LOC110522125 epha7 coding downstream 176559 13572893 ~ 13647267 (-)
LOC110522122 map3k7 coding downstream 626591 13173776 ~ 13197235 (-)
LOC110522120 bach2 coding downstream 672826 13052105 ~ 13151000 (-)
LOC110522101 mdn1 coding downstream 789729 12982926 ~ 13034097 (-)
LOC110522135 prs27 coding upstream 267147 14138716 ~ 14153769 (-)
LOC110522136 prs27 coding upstream 293563 14165132 ~ 14174146 (-)
LOC118964438 prs27 coding upstream 313527 14185096 ~ 14187192 (-)
LOC110522138 LOC106607732 coding upstream 351439 14223008 ~ 14226550 (-)
LOC110522143 NA coding upstream 609756 14481325 ~ 14486331 (-)
G322732 LOC106607723 non-coding downstream 24203 13799249 ~ 13799623 (-)
G322580 NA non-coding downstream 87647 13735968 ~ 13736179 (-)
G322563 NA non-coding downstream 100694 13722888 ~ 13723132 (-)
G322423 NA non-coding downstream 250936 13572159 ~ 13572890 (-)
G322832 LOC107661334 non-coding upstream 61854 13933423 ~ 13933691 (-)
G322833 NA non-coding upstream 63788 13935357 ~ 13935572 (-)
G322850 NA non-coding upstream 83371 13954940 ~ 13955642 (-)
G322882 NA non-coding upstream 118563 13990132 ~ 13990412 (-)
G322885 NA non-coding upstream 119954 13991523 ~ 13991802 (-)
lyrm2 lyrm2 other downstream 841063 12981284 ~ 12982769 (-)
LOC110522115 LOC106571283 other downstream 1276309 12545954 ~ 12547517 (-)
G320883 NA other downstream 1505428 12318003 ~ 12318398 (-)
LOC110522088 LOC106607688 other downstream 1930253 11891326 ~ 11893699 (-)
G323167 prs27 other upstream 256920 14128489 ~ 14187171 (-)
G324432 NA other upstream 1382295 15253864 ~ 15255008 (-)
rnf217 rnf217 other upstream 2147859 16019428 ~ 16125180 (-)
G325696 NA other upstream 2467763 16339332 ~ 16340707 (-)
G325960 LOC106607776 other upstream 2775186 16646755 ~ 16662881 (-)

Expression


Co-expression Network