G323167 (prs27)


Basic Information

Item Value
gene id G323167
gene name prs27
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 14128489 ~ 14187171 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU366076
cacacaaaGCCGTAGCAGCTGATAGGATGGAGTCGGGGTGGGTATTGTGTGCTGTTGTATTTTCGTTGACCTGCATGGGAAAAGgtggcCATTCACAGGCAAATGTGTGTGGCATTGCTTCTCTCAACACAAAGATTGTCGGGGGTCAGGATGCAGCTGCAGGGAGCTGGCCATGGCAGGCCAGTCTGCACCGCTCCAACCGCCATTTTTGTGGAGGCTCCCTTATCAACAAAGAGTGGGTGCTGACTGCCGCTCACTGCTTCCCCAGCACCAGCACGTCCGGCCTGCTTGTCTACCTGGGCCGGCAGAATCAGCAAAGCATCAACTCCAATGAGGTATCCCAAACGGTCTCTCAGATCATCTGCAACCCGAACTACAACAGTGCAACCAGCGACAATGATATATGTTTGCTGAAGCTCTCATCACCTGTCACCTTCACTGACTACATCCAGCCGGTCTGCCTTGCAGCAGAGGACAGCACCTACTACACTGGCACTAATAGCTGGGTCACCGGATGGGGCGATATCAATAGTGATGTGCCCCTTCCCTCACCCGGGACCCTACAGGAGGTGACTGTGCCGGTAGTGGGGAACAGGAAGTGTAACTGTCTCTATACTGGATTTAGTTCAATCACAAACAACATGATCTGTGCTGGTCTACTGAGTGGAGGAAAGGATTCCTGTCAGGGAGACTCCGGGGGGCCAATTGTGAGCAAACAGGGTCTGGTCTGGATCCAGTCTGGGGTTGTTAGTTTTGGAAAAGGCTGTGCCGAAGCAAATTTCCCAGGAGTGTACACCAGAGTGTCCCAGTACCAGACCTGGATCAACAGCCAGATCAGCACTGACATGCCAGGCTTTGTCACCTTCTCCTCCAGTGGGACTGACTCTGATCTCAATGTCACCTGTAATGCACTGTCCAGTGGGGCCacactcttctccctctTTTTTATTCTCA

Function

NR:

description
serine protease 27-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU366076 True 954 TUCP 0.53 7 14128489 14187171
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110522132 LOC106607728 coding downstream 211494 13858184 ~ 13916995 (-)
dse LOC106607725 coding downstream 270315 13829056 ~ 13858174 (-)
LOC110522128 LOC106607726 coding downstream 300991 13825800 ~ 13827498 (-)
LOC110522127 LOC106607724 coding downstream 306578 13809748 ~ 13821911 (-)
LOC110522125 epha7 coding downstream 481222 13572893 ~ 13647267 (-)
LOC110522138 LOC106607732 coding upstream 35837 14223008 ~ 14226550 (-)
LOC110522143 NA coding upstream 294154 14481325 ~ 14486331 (-)
ccn6 wisp3 coding upstream 310369 14497540 ~ 14509695 (-)
mfsd4b LOC106607740 coding upstream 486110 14673281 ~ 14679530 (-)
slc16a10 LOC106607741 coding upstream 494414 14681585 ~ 14735716 (-)
G322939 NA non-coding downstream 100013 14028261 ~ 14028476 (-)
G322919 NA non-coding downstream 114339 14013867 ~ 14014150 (-)
G322911 NA non-coding downstream 124204 14004064 ~ 14004285 (-)
G322909 NA non-coding downstream 125950 14002330 ~ 14002539 (-)
G322885 NA non-coding downstream 136687 13991523 ~ 13991802 (-)
G323207 NA non-coding upstream 15738 14202909 ~ 14203186 (-)
G323208 NA non-coding upstream 16031 14203202 ~ 14203450 (-)
G323223 NA non-coding upstream 39726 14226897 ~ 14227098 (-)
G323228 NA non-coding upstream 48645 14235816 ~ 14236167 (-)
G323229 NA non-coding upstream 49602 14236773 ~ 14237004 (-)
LOC110522122 map3k7 other downstream 945920 13173776 ~ 13197235 (-)
lyrm2 lyrm2 other downstream 1145726 12981284 ~ 12982769 (-)
LOC110522115 LOC106571283 other downstream 1580972 12545954 ~ 12547517 (-)
G320883 NA other downstream 1810091 12318003 ~ 12318398 (-)
LOC110522088 LOC106607688 other downstream 2234916 11891326 ~ 11893699 (-)
G324432 NA other upstream 1066693 15253864 ~ 15255008 (-)
rnf217 rnf217 other upstream 1832257 16019428 ~ 16125180 (-)
G325696 NA other upstream 2152161 16339332 ~ 16340707 (-)
G325960 LOC106607776 other upstream 2459584 16646755 ~ 16662881 (-)
vgll2a LOC106607788 other upstream 3375699 17559268 ~ 17566213 (-)

Expression

G323167(prs27) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 30.
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G323167(prs27) Expression in each Bioproject

Bar chart with 13 bars.
G323167(prs27) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
End of interactive chart.

Co-expression Network