G324664



Basic Information


Item Value
gene id G324664
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 15602706 ~ 15603020 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU367690
GTAGAGCGGTAACACCTGCGGAGCGACTTTACAACTAAGCAAGCTGAAAATAAACAAGACTTCTGCAAAGTTGCACACACTGTCAAACTGCGCGCCAACCGAGCGCTTTGCACAGAGAGCCGGAGGAGCTatctttatttcctccttccttactgctgatgcgctcttaaagtggcagcacggtgaaggctccgtgcaggaTTTCGCCAGGTCAAATAACTCCTCCCCCtcaaataacctctccctcaatgtcaacaaaacgaaggagctgatcgtggacttcaggagacagcagagggagcacacacacccccc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU367690 True 315 lncRNA 0.52 1 15602706 15603020

Neighbor


gene id symbol gene type direction distance location
lama2 lama2 coding upstream 12495 15449797 ~ 15590211 (+)
leg1 leg1 coding upstream 351350 15248791 ~ 15251356 (+)
LOC118964439 LOC106607753 coding upstream 356043 15245760 ~ 15246663 (+)
LOC110522163 LOC106607750 coding upstream 602136 14992265 ~ 15000570 (+)
LOC110522159 LOC100194603 coding upstream 638252 14960197 ~ 14964454 (+)
LOC110522174 LOC106607759 coding downstream 42735 15645755 ~ 15680105 (+)
LOC110522175 LOC106607760 coding downstream 95784 15698804 ~ 15710542 (+)
LOC110522178 NA coding downstream 136074 15739094 ~ 15741483 (+)
LOC110522177 LOC106607761 coding downstream 230119 15833139 ~ 15881137 (+)
il20ra il20ra coding downstream 341473 15944493 ~ 15949042 (+)
G324660 NA non-coding upstream 678 15594070 ~ 15602028 (+)
LOC110522173 LOC106607757 non-coding upstream 10982 15590795 ~ 15613421 (+)
G324597 NA non-coding upstream 134398 15465300 ~ 15468308 (+)
G324557 NA non-coding upstream 172465 15429886 ~ 15430241 (+)
G324544 NA non-coding upstream 184031 15418363 ~ 15418675 (+)
G324584 arhgap18 non-coding downstream 13029 15616049 ~ 15618768 (+)
G324697 NA non-coding downstream 79449 15682469 ~ 15682674 (+)
G324699 NA non-coding downstream 81291 15684311 ~ 15684628 (+)
G324701 NA non-coding downstream 82214 15685234 ~ 15685472 (+)
G324706 NA non-coding downstream 87649 15690669 ~ 15711629 (+)
G322645 NA other upstream 1717203 13850287 ~ 13885503 (+)
G321447 NA other upstream 2459263 13142947 ~ 13143443 (+)
LOC110521046 LOC106607715 other upstream 2621155 12928115 ~ 12981592 (+)
LOC110522108 pm20d2 other upstream 2790341 12800778 ~ 12812377 (+)
LOC110522117 smim8 other upstream 3053592 12548411 ~ 12549119 (+)
G325389 fabp7 other downstream 832233 16435253 ~ 16436882 (+)
G327705 NA other downstream 2661270 18264290 ~ 18304442 (+)
G327995 LOC106607813 other downstream 2824134 18427154 ~ 18428907 (+)
G328474 NA other downstream 3153835 18756855 ~ 18757545 (+)
G328446 LOC106607916 other downstream 3191561 18794581 ~ 18806804 (+)

Expression



Co-expression Network