G324581


Basic Information

Item Value
gene id G324581
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 15712134 ~ 15713547 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU367601
GCTCCGATACTCATCCTAAACAGAAAAAGGTTACAGATAAAGTTGGAGATAGTTTTGGATTTGAGAAGGAAGATAAAGTTTGACTGAGGCCATCTGTAGAGTTAGCATCaaagcaaattacattgtggCTTCAAAGAACAATCAACAAACCAAAGAAGCCAATATctatttcagcataaatattatATCAAAAGAAACAAAAAGTACTTTGTTGTCAGTTCTGCCTCATTGCTAGATCCTCCCACCGCTGCTCCTTGGGGACTCCCCCGTCACTGACGGCAAATTACCTTGGTGGAGCAGGGCAGGCCAGGGTTAATTGGTAGGAGCTGAGAGATGCCTTGGGGTTTGGACCTCGCTCACTCACCAGGGGAATGGGAGCGTTGGGTGAGACCCTGGCCTTCGGGATGCTATTCTAGCTCATTAGGACGTCAATCTGCAACACATTTCCGGCAGGGGTTTGGGACCCCCTGACTGCCATGGCAACAAAGGCACCCTCAGTTTTTAAACCCAAATGCAGCTAGGCAGCTGCTTCAGGCACGCGACAAAAGAGAGCAGCAAAGGATCATGGGTCAAAACAAGAGAAAAACATTAATATGATAAAGATGGCTTAAAATGTCATTGATCCAGTAAGACAGTATCTTGAAATGTGGATGTTTTCTTTATTCAGTTATTCAACTTATGATAAAACTGCTACTTAGCCAAACTAATGAGCAAGCTAAGACTGTTCATTGCCTCTGTCTACTAATTGGCTTACCTTCTGTGAACTTCAGCACCTTGTTATTGTCCTTCGTGTTTTAGGAAACTCCGCCATTAGGCTGCATCCAAGGTCACTCAGGGGCATTACACTCCTATTAATAATGTCTTGACTGAGTCACATGGCCTATTATTCCCCATCCTCATTTTCCAAGAGGCGTGTTGGTAAACCAGAGTGTGACCTATCTTGTCCACACTAAGCTGAGGGTGTCGGGTGAGTCAATGCTGGAGGTCTCGGGGGACTCGACCGTCTCCTGAGGTCCACCTACTTCACATTCTAAACCATTGCAGTGAAATCAGTGACCCACCCTCCTGTCACTATCTCTGAAGGCACCTCTATGTTCAGGGGTCACGTCGTGTTTCAGTGAAATGCCATAACGAGTGCTTGATTGTGCCAAGAGTAGCCTATGAATCATTGTAGGCAGAGTAAATGTTTCACATTGCTTTTAAACACTGTATTGATTGAGAAAATGTCTGTAAGAGCTGGTTATACAGTTTGACTACATAATGGCCTTTAAGGGAGGGACTTCTTTGTCAGTGGCTACTGCTGTGCTGTGAATGGGCTGTGATTGTCATTGTTACCGGGTCCGTGCATAGCAATCAATGACAAGAAATAATGTGTCCTGTCAAGTGTTGTGTttttggcatcattaaagtgaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU367601 True 1414 lncRNA 0.44 1 15712134 15713547

Neighbor

gene id symbol gene type direction distance location
LOC110522175 LOC106607760 coding upstream 1592 15698804 ~ 15710542 (+)
LOC110522174 LOC106607759 coding upstream 32029 15645755 ~ 15680105 (+)
LOC110522173 LOC106607757 coding upstream 98713 15590795 ~ 15613421 (+)
lama2 lama2 coding upstream 121923 15449797 ~ 15590211 (+)
leg1 leg1 coding upstream 460778 15248791 ~ 15251356 (+)
LOC110522178 NA coding downstream 25547 15739094 ~ 15741483 (+)
LOC110522177 LOC106607761 coding downstream 119592 15833139 ~ 15881137 (+)
il20ra il20ra coding downstream 230946 15944493 ~ 15949042 (+)
hddc2 hddc2 coding downstream 354950 16068497 ~ 16073105 (+)
trdn NA coding downstream 608069 16321616 ~ 16370330 (+)
G324706 NA non-coding upstream 505 15690669 ~ 15711629 (+)
G324701 NA non-coding upstream 26662 15685234 ~ 15685472 (+)
G324699 NA non-coding upstream 27506 15684311 ~ 15684628 (+)
G324697 NA non-coding upstream 29460 15682469 ~ 15682674 (+)
G324584 arhgap18 non-coding upstream 93366 15616049 ~ 15618768 (+)
G324719 NA non-coding downstream 4858 15718405 ~ 15718657 (+)
G324720 NA non-coding downstream 5878 15719425 ~ 15719668 (+)
G324794 NA non-coding downstream 171556 15885103 ~ 15886589 (+)
G324795 NA non-coding downstream 173084 15886631 ~ 15886902 (+)
G322645 NA other upstream 1826631 13850287 ~ 13885503 (+)
G321447 NA other upstream 2568691 13142947 ~ 13143443 (+)
LOC110521046 LOC106607715 other upstream 2730583 12928115 ~ 12981592 (+)
LOC110522108 pm20d2 other upstream 2899769 12800778 ~ 12812377 (+)
LOC110522117 smim8 other upstream 3163020 12548411 ~ 12549119 (+)
G325389 fabp7 other downstream 721706 16435253 ~ 16436882 (+)
G327705 NA other downstream 2550743 18264290 ~ 18304442 (+)
G327995 LOC106607813 other downstream 2713607 18427154 ~ 18428907 (+)
G328474 NA other downstream 3043308 18756855 ~ 18757545 (+)
G328446 LOC106607916 other downstream 3081034 18794581 ~ 18806804 (+)

Expression


Co-expression Network