G325389 (fabp7)


Basic Information

Item Value
gene id G325389
gene name fabp7
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 16435253 ~ 16436882 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU368490
actttttgagttaatttttttatttcagcatGTTTCACACATGTTTACAAAGGATGATCTATCATGAaagaaatgtatataaaaatgtctttaaaaaaaagatttcCAGCCCATGTTATAAAACATTTGGAAGGATGAAGTGCAACGGTCAgcatacagtaaaaaaaaaaaaaaaaaagtaaacattggctGTCTCCCAGTAAAATGGACTCAAATGATTTAAATAGTTATGTCTCCCAGCTCATGCCTTCTCATAGGTACGCACTGCCACAATGTCTTCAAATGTGAGAGTCATGACCAATTTTCCATCCTTGATTTCTCTCACAAACTTGGTCTCCTTGCCGTCCCACTTCTGAACGTGCGCAAGCTTATCGCCATCCAAGTTCACAGTGGACTACAAACAGACGGGCAAAATAGGTCAGAATATTGCTCTCACCAACTAGTTACATATAATTACAATGTTATTGGAACTTCTATCAAGCAAGGGATACAACATCCAAAACATAATTCAGATCATATTACTAAATTTGGACTGGGCACTGTAACAGGCTTCTCAAACCCAGTGAAAATTATGAGCGGTTCCAACTGCCCAAAGCCTATAGCTGAGTAGTGTCCAGTGCATATATCCCCAATTTTGACCATAAATCCCACATTGAAGCACTTACTTTACAGTTTCTGTCATCGGCAGTGACTTCGTCAAACTCCTCCCCCAGGTTGAATGATATTTCAGTATTCTTGAAAGTACTCTGGGTTTTTACGACCACTTTGTCCCCCTCTTTTGAGATGATAACCGTTGGTTTGGTCACATTTCCGACCTGCCTTGTTGCAAAACCAACACCTGCGAAATTAAGGAAAAAATGTAATAAGAGGTGTGATCATGCGA
>TU368491
actttttgagttaatttttttatttcagcatGTTTCACACATGTTTACAAAGGATGATCTATCATGAaagaaatgtatataaaaatgtctttaaaaaaaagatttcCAGCCCATGTTATAAAACATTTGGAAGGATGAAGTGCAACGGTCAgcatacagtaaaaaaaaaaaaaaaaaagtaaacattggctGTCTCCCAGTAAAATGGACTCAAATGATTTAAATAGTTATGTCTCCCAGCTCATGCCTTCTCATAGGTACGCACTGCCACAATGTCTTCAAATGTGAGCCATGACCAATTTTCCATCCTTGATTTCTCTCACAAACTTGGTCTCCTTGCCGTCCCACTTCTGAACGTGCGCAAGCTTATCGCCATCCAAGTTCACAGTGGACTACAAACAGACGGGCAAAATAGGTCAGAATATTGCTCTCACCAACTAGTTACATATAATTACAATGTTATTGGAACTTCTATCAAGCAAGGGATACAACATCCAAAACATAATTCAGATCATATTACTAAATTTGGACTGGGCACTGTAACAGGCTTCTCAAACCCAGTGAAAATTATGAGCGGTTCCAACTGCCCAAAGCCTATAGCTGAGTAGTGTCCAGTGCATATATCCCCAATTTTGACCATAAATCCCACATTGAAGCACTTACTTTACAGTTTCTGTCATCGGCAGTGACTTCGTCAAACTCCTCCCCCAGGTTGAATGATATTTCAGTATTCTTGAAAGTACTCTGGGTTTTTACGACCACTTTGTCCCCCTCTTTTGAGATGATAACCGTTGGTTTGGTCACATTTCCGACCTGCCTTGTTGCAAAACCAACACCAAGTGCTTTCATGTACTCATCGAAGTTTTCACTGTCGACCAGTTTCCAGGTGGCACAGAAGGCATCAACCATGATGAAGAGTTAGAGGACCGTGCAATAAGAGAACTGAGGTAAAGTTAATACTGATGAGTCTGTGAGCGTTTTCCCGTACACCTACG

Function

symbol description
fabp7 Predicted to enable lipid binding activity. Predicted to be involved in negative regulation of cell population proliferation and nervous system development. Predicted to act upstream of or within cell proliferation in forebrain; neurogenesis; and prepulse inhibition. Predicted to be located in several cellular components, including cell projection; cell-cell junction; and neuronal cell body. Biomarker of glioblastoma.

NR:

description
fatty acid-binding protein, brain

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU368490 False 883 TUCP 0.39 2 16435253 16436634
TU368491 True 995 lncRNA 0.40 3 16435253 16436882

Neighbor

gene id symbol gene type direction distance location
LOC110522197 NA coding upstream 1825 16430743 ~ 16433428 (+)
LOC110522194 NA coding upstream 59400 16373818 ~ 16375853 (+)
trdn NA coding upstream 64923 16321616 ~ 16370330 (+)
hddc2 hddc2 coding upstream 362148 16068497 ~ 16073105 (+)
il20ra il20ra coding upstream 486211 15944493 ~ 15949042 (+)
serinc1 serinc1 coding downstream 28550 16465432 ~ 16470220 (+)
LOC110520973 LOC106571536 coding downstream 213974 16650856 ~ 16652608 (+)
tbc1d32 tbc1d32 coding downstream 231364 16668246 ~ 16710807 (+)
LOC110522207 LOC106607779 coding downstream 403544 16840426 ~ 17003919 (+)
LOC110522208 LOC106607780 coding downstream 594632 17031514 ~ 17195032 (+)
G325414 NA non-coding upstream 16734 16418304 ~ 16418519 (+)
G325388 NA non-coding upstream 68841 16364560 ~ 16366412 (+)
G325217 NA non-coding upstream 305138 16127669 ~ 16130115 (+)
G325185 NA non-coding upstream 422748 16012304 ~ 16012505 (+)
G325790 NA non-coding downstream 66435 16503317 ~ 16503583 (+)
G325807 NA non-coding downstream 80974 16517856 ~ 16518168 (+)
G325809 NA non-coding downstream 82380 16519262 ~ 16519749 (+)
G325882 NA non-coding downstream 141776 16578658 ~ 16579014 (+)
G325888 NA non-coding downstream 144580 16581462 ~ 16581661 (+)
G322645 NA other upstream 2549750 13850287 ~ 13885503 (+)
G321447 NA other upstream 3291810 13142947 ~ 13143443 (+)
LOC110521046 LOC106607715 other upstream 3453702 12928115 ~ 12981592 (+)
LOC110522108 pm20d2 other upstream 3622888 12800778 ~ 12812377 (+)
LOC110522117 smim8 other upstream 3886139 12548411 ~ 12549119 (+)
G327705 NA other downstream 1827408 18264290 ~ 18304442 (+)
G327995 LOC106607813 other downstream 1990272 18427154 ~ 18428907 (+)
G328474 NA other downstream 2319973 18756855 ~ 18757545 (+)
G328446 LOC106607916 other downstream 2357699 18794581 ~ 18806804 (+)
LOC110522244 LOC106607820 other downstream 2486824 18882852 ~ 18952184 (+)

Expression


Co-expression Network