G325790


Basic Information

Item Value
gene id G325790
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 16503317 ~ 16503583 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU368924
ACAATTTCTTTGCACTTTGCTAATTAAAGATATAGGCAGGAAAACACACCCAGGTTGTAATCGAATCAATTCAATGTAAATGGTAGAAGCACACCCCTGTGTCACTCCTCTTTGAACTATTCCCCATTTGATGAACAGAATAACGGCGCCTGCAAATTGCGAGTATCACCTTCTTTAATtttcccatcacaataacaccaGCTGCACCTGGTCTGAGTTAACATGACAGTCATACAACTGAACATAGCCTGTTATGATTCATTGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU368924 True 267 lncRNA 0.40 1 16503317 16503583

Neighbor

gene id symbol gene type direction distance location
serinc1 serinc1 coding upstream 33097 16465432 ~ 16470220 (+)
LOC110522197 NA coding upstream 69889 16430743 ~ 16433428 (+)
LOC110522194 NA coding upstream 127464 16373818 ~ 16375853 (+)
trdn NA coding upstream 132987 16321616 ~ 16370330 (+)
hddc2 hddc2 coding upstream 430212 16068497 ~ 16073105 (+)
LOC110520973 LOC106571536 coding downstream 147273 16650856 ~ 16652608 (+)
tbc1d32 tbc1d32 coding downstream 164663 16668246 ~ 16710807 (+)
LOC110522207 LOC106607779 coding downstream 336843 16840426 ~ 17003919 (+)
LOC110522208 LOC106607780 coding downstream 527931 17031514 ~ 17195032 (+)
LOC110521049 NA coding downstream 693861 17197444 ~ 17217228 (+)
G325389 fabp7 non-coding upstream 66435 16435253 ~ 16436882 (+)
G325414 NA non-coding upstream 84798 16418304 ~ 16418519 (+)
G325388 NA non-coding upstream 136905 16364560 ~ 16366412 (+)
G325217 NA non-coding upstream 373202 16127669 ~ 16130115 (+)
G325807 NA non-coding downstream 14273 16517856 ~ 16518168 (+)
G325809 NA non-coding downstream 15679 16519262 ~ 16519749 (+)
G325882 NA non-coding downstream 75075 16578658 ~ 16579014 (+)
G325888 NA non-coding downstream 77879 16581462 ~ 16581661 (+)
G325912 NA non-coding downstream 115997 16619580 ~ 16619820 (+)
G322645 NA other upstream 2617814 13850287 ~ 13885503 (+)
G321447 NA other upstream 3359874 13142947 ~ 13143443 (+)
LOC110521046 LOC106607715 other upstream 3521766 12928115 ~ 12981592 (+)
LOC110522108 pm20d2 other upstream 3690952 12800778 ~ 12812377 (+)
G327705 NA other downstream 1760707 18264290 ~ 18304442 (+)
G327995 LOC106607813 other downstream 1923571 18427154 ~ 18428907 (+)
G328474 NA other downstream 2253272 18756855 ~ 18757545 (+)
G328446 LOC106607916 other downstream 2290998 18794581 ~ 18806804 (+)
LOC110522244 LOC106607820 other downstream 2420123 18882852 ~ 18952184 (+)

Expression


Co-expression Network