G325888


Basic Information

Item Value
gene id G325888
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 16581462 ~ 16581661 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU369022
tgacaatgacccaaaacacacggccaaggcaacaaagtagtggctcaagaagaagcacattaaggtcctggagtggcctagccagtctccagaccttaatcccatagaaaatctgtggagggagctgaaggttcgagttgccaaacgtcagcctcgaaaccttaatgacttggagaagatctgcaaagaggagtgggaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU369022 True 200 lncRNA 0.49 1 16581462 16581661

Neighbor

gene id symbol gene type direction distance location
serinc1 serinc1 coding upstream 111242 16465432 ~ 16470220 (+)
LOC110522197 NA coding upstream 148034 16430743 ~ 16433428 (+)
LOC110522194 NA coding upstream 205609 16373818 ~ 16375853 (+)
trdn NA coding upstream 211132 16321616 ~ 16370330 (+)
hddc2 hddc2 coding upstream 508357 16068497 ~ 16073105 (+)
LOC110520973 LOC106571536 coding downstream 69195 16650856 ~ 16652608 (+)
tbc1d32 tbc1d32 coding downstream 86585 16668246 ~ 16710807 (+)
LOC110522207 LOC106607779 coding downstream 258765 16840426 ~ 17003919 (+)
LOC110522208 LOC106607780 coding downstream 449853 17031514 ~ 17195032 (+)
LOC110521049 NA coding downstream 615783 17197444 ~ 17217228 (+)
G325882 NA non-coding upstream 2448 16578658 ~ 16579014 (+)
G325809 NA non-coding upstream 61713 16519262 ~ 16519749 (+)
G325807 NA non-coding upstream 63294 16517856 ~ 16518168 (+)
G325790 NA non-coding upstream 77879 16503317 ~ 16503583 (+)
G325389 fabp7 non-coding upstream 144580 16435253 ~ 16436882 (+)
G325912 NA non-coding downstream 37919 16619580 ~ 16619820 (+)
G325908 LOC106607775 non-coding downstream 46819 16628480 ~ 16699949 (+)
G325957 NA non-coding downstream 131655 16713316 ~ 16713594 (+)
G326040 NA non-coding downstream 137898 16719559 ~ 16719787 (+)
G326042 NA non-coding downstream 140276 16721937 ~ 16722167 (+)
G322645 NA other upstream 2695959 13850287 ~ 13885503 (+)
G321447 NA other upstream 3438019 13142947 ~ 13143443 (+)
LOC110521046 LOC106607715 other upstream 3599911 12928115 ~ 12981592 (+)
LOC110522108 pm20d2 other upstream 3769097 12800778 ~ 12812377 (+)
G327705 NA other downstream 1682629 18264290 ~ 18304442 (+)
G327995 LOC106607813 other downstream 1845493 18427154 ~ 18428907 (+)
G328474 NA other downstream 2175194 18756855 ~ 18757545 (+)
G328446 LOC106607916 other downstream 2212920 18794581 ~ 18806804 (+)
LOC110522244 LOC106607820 other downstream 2342045 18882852 ~ 18952184 (+)

Expression


Co-expression Network