Gene
RNA
| Item | Value |
|---|---|
| gene id | G327493 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 17978099 ~ 17978378 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU370788 | True | 280 | lncRNA | 0.41 | 1 | 17978099 | 17978378 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522227 | sprtn | coding | downstream | 42349 | 17932013 ~ 17935750 (-) |
| LOC110522225 | LOC106607804 | coding | downstream | 49269 | 17924571 ~ 17928830 (-) |
| LOC110522223 | LOC106571397 | coding | downstream | 70770 | 17888596 ~ 17907329 (-) |
| selenol | sell | coding | downstream | 89798 | 17884222 ~ 17888301 (-) |
| igf2r | LOC106607799 | coding | downstream | 99575 | 17845560 ~ 17878524 (-) |
| LOC110522229 | LOC106607809 | coding | upstream | 43635 | 18022013 ~ 18286490 (-) |
| esco2 | esco2 | coding | upstream | 413566 | 18391944 ~ 18396426 (-) |
| LOC110522235 | LOC106607813 | coding | upstream | 448940 | 18427318 ~ 18443722 (-) |
| LOC110522236 | LOC106607814 | coding | upstream | 495236 | 18473614 ~ 18497237 (-) |
| LOC110522238 | LOC100194707 | coding | upstream | 545297 | 18523675 ~ 18545606 (-) |
| G327488 | NA | non-coding | downstream | 6460 | 17971402 ~ 17971639 (-) |
| G327456 | LOC106607806 | non-coding | downstream | 39539 | 17936038 ~ 17938560 (-) |
| G327367 | plg | non-coding | downstream | 143240 | 17832034 ~ 17834859 (-) |
| G327370 | NA | non-coding | downstream | 146409 | 17809141 ~ 17831690 (-) |
| G327387 | NA | non-coding | downstream | 189528 | 17780129 ~ 17788571 (-) |
| G327514 | NA | non-coding | upstream | 13050 | 17991428 ~ 17991681 (-) |
| G327532 | NA | non-coding | upstream | 30672 | 18009050 ~ 18009382 (-) |
| G327546 | NA | non-coding | upstream | 39238 | 18017616 ~ 18017840 (-) |
| G327920 | NA | non-coding | upstream | 336454 | 18314832 ~ 18315077 (-) |
| G328186 | ccdc25 | non-coding | upstream | 422080 | 18400458 ~ 18401609 (-) |
| G327409 | LOC106607793 | other | downstream | 177630 | 17795190 ~ 17800469 (-) |
| vgll2a | LOC106607788 | other | downstream | 411952 | 17559268 ~ 17566213 (-) |
| G325960 | LOC106607776 | other | downstream | 1315218 | 16646755 ~ 16662881 (-) |
| G325696 | NA | other | downstream | 1637392 | 16339332 ~ 16340707 (-) |
| rnf217 | rnf217 | other | downstream | 1873411 | 16019428 ~ 16125180 (-) |
| G328236 | NA | other | upstream | 468205 | 18446583 ~ 18447030 (-) |
| G328760 | NA | other | upstream | 816728 | 18795022 ~ 18862375 (-) |
| G329663 | LOC106607828 | other | upstream | 1302760 | 19281138 ~ 19281481 (-) |
| G329681 | NA | other | upstream | 1332715 | 19311093 ~ 19318679 (-) |
