Gene
RNA
| Item | Value |
|---|---|
| gene id | G328375 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 18662162 ~ 18662436 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU371724 | True | 275 | lncRNA | 0.36 | 1 | 18662162 | 18662436 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522239 | cited2 | coding | downstream | 111581 | 18547787 ~ 18550581 (-) |
| LOC110522238 | LOC100194707 | coding | downstream | 116556 | 18523675 ~ 18545606 (-) |
| LOC110522236 | LOC106607814 | coding | downstream | 164925 | 18473614 ~ 18497237 (-) |
| LOC110522235 | LOC106607813 | coding | downstream | 218440 | 18427318 ~ 18443722 (-) |
| esco2 | esco2 | coding | downstream | 265736 | 18391944 ~ 18396426 (-) |
| LOC110522240 | LOC106607916 | coding | upstream | 138856 | 18801292 ~ 18812642 (-) |
| LOC110520976 | LOC106607917 | coding | upstream | 301954 | 18964390 ~ 18978387 (-) |
| LOC110522245 | hivep2 | coding | upstream | 357555 | 19019991 ~ 19119788 (-) |
| LOC110520978 | batf3 | coding | upstream | 579423 | 19241859 ~ 19243094 (-) |
| LOC110522252 | LOC106607829 | coding | upstream | 665711 | 19328013 ~ 19453370 (-) |
| G328184 | NA | non-coding | downstream | 135108 | 18510053 ~ 18527054 (-) |
| G328223 | NA | non-coding | downstream | 188735 | 18472787 ~ 18473427 (-) |
| G328239 | NA | non-coding | downstream | 213431 | 18448485 ~ 18448731 (-) |
| G328234 | NA | non-coding | downstream | 216902 | 18444813 ~ 18445260 (-) |
| G328212 | NA | non-coding | downstream | 250928 | 18410901 ~ 18411234 (-) |
| G328386 | NA | non-coding | upstream | 8660 | 18671096 ~ 18671306 (-) |
| G328399 | NA | non-coding | upstream | 20695 | 18683131 ~ 18683426 (-) |
| G328764 | NA | non-coding | upstream | 56524 | 18718960 ~ 18719250 (-) |
| G328777 | NA | non-coding | upstream | 77220 | 18739656 ~ 18739937 (-) |
| G328792 | NA | non-coding | upstream | 96828 | 18759264 ~ 18759837 (-) |
| G328236 | NA | other | downstream | 215132 | 18446583 ~ 18447030 (-) |
| LOC110522229 | LOC106607809 | other | downstream | 376752 | 18022013 ~ 18286490 (-) |
| G327409 | LOC106607793 | other | downstream | 861693 | 17795190 ~ 17800469 (-) |
| vgll2a | LOC106607788 | other | downstream | 1096015 | 17559268 ~ 17566213 (-) |
| G325960 | LOC106607776 | other | downstream | 1999281 | 16646755 ~ 16662881 (-) |
| G328760 | NA | other | upstream | 132670 | 18795022 ~ 18862375 (-) |
| G329663 | LOC106607828 | other | upstream | 618702 | 19281138 ~ 19281481 (-) |
| G329681 | NA | other | upstream | 648657 | 19311093 ~ 19318679 (-) |
| LOC110522258 | LOC106607836 | other | upstream | 1031128 | 19678324 ~ 19728627 (-) |
| rcan2 | LOC106607629 | other | upstream | 1618690 | 20166436 ~ 20286886 (-) |
