Gene
RNA
| Item | Value |
|---|---|
| gene id | G328760 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 18795022 ~ 18862375 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU372147 | False | 1056 | lncRNA | 0.44 | 2 | 18795022 | 18799253 |
| TU372144 | False | 1091 | TUCP | 0.46 | 2 | 18795106 | 18862375 |
| TU372150 | True | 809 | lncRNA | 0.45 | 2 | 18798206 | 18859914 |
18,780,000
18,790,000
18,800,000
18,810,000
18,820,000
18,830,000
18,840,000
18,850,000
18,850,000
18,860,000
18,870,000
18,880,000
18,890,000
18,900,000
18,910,000
18,920,000
NC_048568.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522239 | cited2 | coding | downstream | 244441 | 18547787 ~ 18550581 (-) |
| LOC110522238 | LOC100194707 | coding | downstream | 249416 | 18523675 ~ 18545606 (-) |
| LOC110522236 | LOC106607814 | coding | downstream | 297785 | 18473614 ~ 18497237 (-) |
| LOC110522235 | LOC106607813 | coding | downstream | 351300 | 18427318 ~ 18443722 (-) |
| esco2 | esco2 | coding | downstream | 398596 | 18391944 ~ 18396426 (-) |
| LOC110520976 | LOC106607917 | coding | upstream | 104476 | 18964390 ~ 18978387 (-) |
| LOC110522245 | hivep2 | coding | upstream | 160077 | 19019991 ~ 19119788 (-) |
| LOC110520978 | batf3 | coding | upstream | 381945 | 19241859 ~ 19243094 (-) |
| LOC110522252 | LOC106607829 | coding | upstream | 468233 | 19328013 ~ 19453370 (-) |
| itpkb | LOC106607834 | coding | upstream | 723305 | 19583219 ~ 19637211 (-) |
| G328808 | NA | non-coding | downstream | 13985 | 18780805 ~ 18781037 (-) |
| G328796 | NA | non-coding | downstream | 26773 | 18768038 ~ 18768249 (-) |
| G328793 | NA | non-coding | downstream | 33471 | 18761274 ~ 18761551 (-) |
| G328792 | NA | non-coding | downstream | 35185 | 18759264 ~ 18759837 (-) |
| G328777 | NA | non-coding | downstream | 55085 | 18739656 ~ 18739937 (-) |
| G328893 | NA | non-coding | upstream | 57009 | 18916923 ~ 18921923 (-) |
| G328912 | NA | non-coding | upstream | 90007 | 18949921 ~ 18952174 (-) |
| G328973 | NA | non-coding | upstream | 170228 | 19030142 ~ 19030349 (-) |
| G328985 | NA | non-coding | upstream | 191422 | 19051336 ~ 19051560 (-) |
| G328987 | NA | non-coding | upstream | 193118 | 19053032 ~ 19053684 (-) |
| G328236 | NA | other | downstream | 347992 | 18446583 ~ 18447030 (-) |
| LOC110522229 | LOC106607809 | other | downstream | 509612 | 18022013 ~ 18286490 (-) |
| G327409 | LOC106607793 | other | downstream | 994553 | 17795190 ~ 17800469 (-) |
| vgll2a | LOC106607788 | other | downstream | 1228875 | 17559268 ~ 17566213 (-) |
| G325960 | LOC106607776 | other | downstream | 2132141 | 16646755 ~ 16662881 (-) |
| G329663 | LOC106607828 | other | upstream | 421224 | 19281138 ~ 19281481 (-) |
| G329681 | NA | other | upstream | 451179 | 19311093 ~ 19318679 (-) |
| LOC110522258 | LOC106607836 | other | upstream | 833650 | 19678324 ~ 19728627 (-) |
| rcan2 | LOC106607629 | other | upstream | 1421212 | 20166436 ~ 20286886 (-) |
| LOC110522275 | LOC106607631 | other | upstream | 1483255 | 20328761 ~ 20419762 (-) |
