Gene
RNA
| Item | Value |
|---|---|
| gene id | G329601 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 20219015 ~ 20219491 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU373112 | True | 477 | lncRNA | 0.38 | 1 | 20219015 | 20219491 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| msra | msra | coding | upstream | 60170 | 20055721 ~ 20158845 (+) |
| ift172 | ift172 | coding | upstream | 175178 | 20015451 ~ 20043837 (+) |
| trnaa-ugc-6 | NA | coding | upstream | 203744 | 20015200 ~ 20015271 (+) |
| ucn | urotensin-i | coding | upstream | 286021 | 19929307 ~ 19932994 (+) |
| LOC110522264 | mpv17 | coding | upstream | 293745 | 19895886 ~ 19925270 (+) |
| slc25a27 | slc25a27 | coding | downstream | 84229 | 20303720 ~ 20309419 (+) |
| LOC110522276 | ptrhd1 | coding | downstream | 107604 | 20327095 ~ 20328613 (+) |
| LOC110522280 | NA | coding | downstream | 200713 | 20420184 ~ 20423056 (+) |
| LOC118964445 | NA | coding | downstream | 208402 | 20427893 ~ 20431723 (+) |
| LOC110522277 | LOC106607858 | coding | downstream | 214283 | 20433774 ~ 20471815 (+) |
| G329590 | NA | non-coding | upstream | 15019 | 20203568 ~ 20203996 (+) |
| G329573 | NA | non-coding | upstream | 61033 | 20156276 ~ 20157982 (+) |
| G329493 | NA | non-coding | upstream | 230083 | 19988394 ~ 19988932 (+) |
| G329473 | NA | non-coding | upstream | 265097 | 19951181 ~ 19953918 (+) |
| G329359 | NA | non-coding | upstream | 451663 | 19752847 ~ 19767352 (+) |
| G329604 | NA | non-coding | downstream | 1939 | 20221430 ~ 20221686 (+) |
| G329605 | NA | non-coding | downstream | 2351 | 20221842 ~ 20222049 (+) |
| G329607 | NA | non-coding | downstream | 5036 | 20224527 ~ 20224822 (+) |
| G329610 | NA | non-coding | downstream | 9381 | 20228872 ~ 20229151 (+) |
| G329613 | NA | non-coding | downstream | 17457 | 20236948 ~ 20237307 (+) |
| G329556 | NA | other | upstream | 118959 | 20097356 ~ 20100056 (+) |
| LOC110522251 | LOC106607828 | other | upstream | 948490 | 19269334 ~ 19308960 (+) |
| LOC110522250 | LOC106607827 | other | upstream | 950459 | 19258560 ~ 19268556 (+) |
| LOC110522244 | LOC106607820 | other | upstream | 1289938 | 18882852 ~ 18952184 (+) |
| G328446 | LOC106607916 | other | upstream | 1412211 | 18794581 ~ 18806804 (+) |
| G329626 | NA | other | downstream | 33276 | 20252767 ~ 20253911 (+) |
| G330771 | NA | other | downstream | 601177 | 20820668 ~ 20821157 (+) |
| LOC110522308 | LOC106607893 | other | downstream | 1464443 | 21683716 ~ 21701617 (+) |
| G332458 | LOC106584613 | other | downstream | 2279009 | 22498500 ~ 22498996 (+) |
| G332507 | NA | other | downstream | 2373439 | 22592930 ~ 22593362 (+) |
