G329613


Basic Information

Item Value
gene id G329613
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 20236948 ~ 20237307 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU373124
gttcagatatcggtaagtggactgacGCAGGGCATGAaaggataacaaatccagttgtttgtgtcgtccgtttcgggaaagtacctgagtaattgcgcacccaactcactcaggtgctttgctatatcacatttggcattgtccgtaagcttgggttcatttgcacacaaaaaaatcatataatgatggaaagacctgtgtgttatccttgttaatgcagacagaaaagagctccaacttcttaatcatagcctcaattctGTCCCGCACATTAactatagttgcggagagtctcTTTAACACTTCTTAGGGCTGtaatcccattaacgggattgatatgacaacagccagtgaaagtac

Function

NR:

description
PREDICTED: zinc finger BED domain-containing protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU373124 True 360 lncRNA 0.42 1 20236948 20237307

Neighbor

gene id symbol gene type direction distance location
msra msra coding upstream 78103 20055721 ~ 20158845 (+)
ift172 ift172 coding upstream 193111 20015451 ~ 20043837 (+)
trnaa-ugc-6 NA coding upstream 221677 20015200 ~ 20015271 (+)
ucn urotensin-i coding upstream 303954 19929307 ~ 19932994 (+)
LOC110522264 mpv17 coding upstream 311678 19895886 ~ 19925270 (+)
slc25a27 slc25a27 coding downstream 66413 20303720 ~ 20309419 (+)
LOC110522276 ptrhd1 coding downstream 89788 20327095 ~ 20328613 (+)
LOC110522280 NA coding downstream 182897 20420184 ~ 20423056 (+)
LOC118964445 NA coding downstream 190586 20427893 ~ 20431723 (+)
LOC110522277 LOC106607858 coding downstream 196467 20433774 ~ 20471815 (+)
G329610 NA non-coding upstream 7797 20228872 ~ 20229151 (+)
G329607 NA non-coding upstream 12126 20224527 ~ 20224822 (+)
G329605 NA non-coding upstream 14899 20221842 ~ 20222049 (+)
G329604 NA non-coding upstream 15262 20221430 ~ 20221686 (+)
G329601 NA non-coding upstream 17457 20219015 ~ 20219491 (+)
G329624 NA non-coding downstream 13245 20250552 ~ 20250874 (+)
G329629 NA non-coding downstream 19511 20256818 ~ 20258537 (+)
G329630 NA non-coding downstream 22589 20259896 ~ 20260111 (+)
G329632 NA non-coding downstream 26478 20263785 ~ 20264036 (+)
G329641 NA non-coding downstream 49703 20287010 ~ 20288218 (+)
G329556 NA other upstream 136892 20097356 ~ 20100056 (+)
LOC110522251 LOC106607828 other upstream 966423 19269334 ~ 19308960 (+)
LOC110522250 LOC106607827 other upstream 968392 19258560 ~ 19268556 (+)
LOC110522244 LOC106607820 other upstream 1307871 18882852 ~ 18952184 (+)
G328446 LOC106607916 other upstream 1430144 18794581 ~ 18806804 (+)
G329626 NA other downstream 15460 20252767 ~ 20253911 (+)
G330771 NA other downstream 583361 20820668 ~ 20821157 (+)
LOC110522308 LOC106607893 other downstream 1446627 21683716 ~ 21701617 (+)
G332458 LOC106584613 other downstream 2261193 22498500 ~ 22498996 (+)
G332507 NA other downstream 2355623 22592930 ~ 22593362 (+)

Expression


Co-expression Network