Gene
RNA
| Item | Value |
|---|---|
| gene id | G329632 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 20263785 ~ 20264036 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU373144 | True | 252 | lncRNA | 0.48 | 1 | 20263785 | 20264036 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| msra | msra | coding | upstream | 104940 | 20055721 ~ 20158845 (+) |
| ift172 | ift172 | coding | upstream | 219948 | 20015451 ~ 20043837 (+) |
| trnaa-ugc-6 | NA | coding | upstream | 248514 | 20015200 ~ 20015271 (+) |
| ucn | urotensin-i | coding | upstream | 330791 | 19929307 ~ 19932994 (+) |
| LOC110522264 | mpv17 | coding | upstream | 338515 | 19895886 ~ 19925270 (+) |
| slc25a27 | slc25a27 | coding | downstream | 39684 | 20303720 ~ 20309419 (+) |
| LOC110522276 | ptrhd1 | coding | downstream | 63059 | 20327095 ~ 20328613 (+) |
| LOC110522280 | NA | coding | downstream | 156168 | 20420184 ~ 20423056 (+) |
| LOC118964445 | NA | coding | downstream | 163857 | 20427893 ~ 20431723 (+) |
| LOC110522277 | LOC106607858 | coding | downstream | 169738 | 20433774 ~ 20471815 (+) |
| G329630 | NA | non-coding | upstream | 3674 | 20259896 ~ 20260111 (+) |
| G329629 | NA | non-coding | upstream | 5248 | 20256818 ~ 20258537 (+) |
| G329624 | NA | non-coding | upstream | 12911 | 20250552 ~ 20250874 (+) |
| G329613 | NA | non-coding | upstream | 26478 | 20236948 ~ 20237307 (+) |
| G329610 | NA | non-coding | upstream | 34634 | 20228872 ~ 20229151 (+) |
| G329641 | NA | non-coding | downstream | 22974 | 20287010 ~ 20288218 (+) |
| G329649 | LOC106607854 | non-coding | downstream | 45741 | 20309777 ~ 20311353 (+) |
| G329650 | LOC106607854 | non-coding | downstream | 48024 | 20312060 ~ 20317290 (+) |
| G330215 | NA | non-coding | downstream | 71188 | 20335224 ~ 20335624 (+) |
| G329626 | NA | other | upstream | 9874 | 20252767 ~ 20253911 (+) |
| G329556 | NA | other | upstream | 163729 | 20097356 ~ 20100056 (+) |
| LOC110522251 | LOC106607828 | other | upstream | 993260 | 19269334 ~ 19308960 (+) |
| LOC110522250 | LOC106607827 | other | upstream | 995229 | 19258560 ~ 19268556 (+) |
| LOC110522244 | LOC106607820 | other | upstream | 1334708 | 18882852 ~ 18952184 (+) |
| G330771 | NA | other | downstream | 556632 | 20820668 ~ 20821157 (+) |
| LOC110522308 | LOC106607893 | other | downstream | 1419898 | 21683716 ~ 21701617 (+) |
| G332458 | LOC106584613 | other | downstream | 2234464 | 22498500 ~ 22498996 (+) |
| G332507 | NA | other | downstream | 2328894 | 22592930 ~ 22593362 (+) |
| G333079 | smyd2 | other | downstream | 2691843 | 22955879 ~ 22958196 (+) |
